G261278



Basic Information


Item Value
gene id G261278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 43905046 ~ 43905310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU297251
CCACTGAGTCCTGGAGGAACTCACACTTGCTGCGTTTCATTCTCACTCCATATTTCTCCAGTCTTGACATCACTTTGTCCAGCACTACAAGGTGCTCTCCAATGGTTGGTGCTGACACGAGGATGTCGTCCATGAAGCACACAACATGGTCTATACCGTCCAAGATCTGATCCATTGTTTGTTGGAATATCGCTGGAGCTGTCGAGATTCCATAGGCCAAGCGATTGAATCTGAATAGCCccttgtgtgtattgatggtcAGATA

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU297251 True 265 lncRNA 0.47 1 43905046 43905310

Neighbor


gene id symbol gene type direction distance location
LOC110519997 lct coding upstream 9398 43876264 ~ 43895648 (+)
LOC110519995 LOC106586118 coding upstream 29226 43857089 ~ 43875820 (+)
LOC110519994 LOC100380648 coding upstream 59417 43830961 ~ 43845629 (+)
LOC110519984 LOC106586113 coding upstream 391159 43169785 ~ 43513887 (+)
LOC110519989 LOC106581699 coding upstream 821286 43051602 ~ 43083760 (+)
LOC118956122 NA coding downstream 37814 43943124 ~ 43986958 (+)
LOC110504116 LOC106586120 coding downstream 170512 44075822 ~ 44208107 (+)
LOC110520002 LOC106586124 coding downstream 564861 44470171 ~ 44475272 (+)
LOC118964364 NA coding downstream 929201 44834511 ~ 44834565 (+)
cd18 cd18 coding downstream 973350 44878660 ~ 44903676 (+)
G261277 LOC105893191 non-coding upstream 171 43904502 ~ 43904875 (+)
G261274 NA non-coding upstream 3859 43900908 ~ 43901187 (+)
G261272 NA non-coding upstream 5171 43899667 ~ 43899875 (+)
G261269 NA non-coding upstream 7492 43897347 ~ 43897554 (+)
G261268 NA non-coding upstream 7928 43895840 ~ 43897118 (+)
G261279 NA non-coding downstream 244 43905554 ~ 43905842 (+)
G261283 NA non-coding downstream 5404 43910714 ~ 43910969 (+)
G261285 NA non-coding downstream 7239 43912549 ~ 43912819 (+)
G261288 NA non-coding downstream 9745 43915055 ~ 43915284 (+)
G261338 NA non-coding downstream 15975 43921285 ~ 43953149 (+)
LOC110519969 LOC106586020 other upstream 3452866 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 4236958 39658753 ~ 39668297 (+)
G254816 NA other upstream 5060490 38843510 ~ 38844556 (+)
G254445 NA other upstream 5304180 38600487 ~ 38600866 (+)
G254204 NA other upstream 5463312 38441166 ~ 38441734 (+)
G261749 NA other downstream 346759 44252069 ~ 44252551 (+)
G262037 NA other downstream 615109 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 1933611 45838921 ~ 45839480 (+)
G263710 NA other downstream 2028809 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 2170174 46075484 ~ 46079425 (+)

Expression



Co-expression Network