G261288


Basic Information

Item Value
gene id G261288
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 43915055 ~ 43915284 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU297261
ctatagaAGATGAAGTTCAGTCattgtggaaaatgtcaagaacattTAAAGTTTGTTCAAGTGCAGGCAAAAAACACATCAAGCACTTTGATGAAACTGACTCgcatgaggaccgccactggaaagcaagacccagagttaactctgctggagaggataagttcattagcgttaACTGCAAATCAGATTGCTGCCCCctaaaaatgcttcacagagttcaagtaacaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297261 True 230 lncRNA 0.41 1 43915055 43915284

Neighbor

gene id symbol gene type direction distance location
LOC110519997 lct coding upstream 19407 43876264 ~ 43895648 (+)
LOC110519995 LOC106586118 coding upstream 39235 43857089 ~ 43875820 (+)
LOC110519994 LOC100380648 coding upstream 69426 43830961 ~ 43845629 (+)
LOC110519984 LOC106586113 coding upstream 401168 43169785 ~ 43513887 (+)
LOC110519989 LOC106581699 coding upstream 831295 43051602 ~ 43083760 (+)
LOC118956122 NA coding downstream 27840 43943124 ~ 43986958 (+)
LOC110504116 LOC106586120 coding downstream 160538 44075822 ~ 44208107 (+)
LOC110520002 LOC106586124 coding downstream 554887 44470171 ~ 44475272 (+)
LOC118964364 NA coding downstream 919227 44834511 ~ 44834565 (+)
cd18 cd18 coding downstream 963376 44878660 ~ 44903676 (+)
G261285 NA non-coding upstream 2236 43912549 ~ 43912819 (+)
G261283 NA non-coding upstream 4086 43910714 ~ 43910969 (+)
G261279 NA non-coding upstream 9213 43905554 ~ 43905842 (+)
G261278 NA non-coding upstream 9745 43905046 ~ 43905310 (+)
G261277 LOC105893191 non-coding upstream 10180 43904502 ~ 43904875 (+)
G261338 NA non-coding downstream 6001 43921285 ~ 43953149 (+)
G261380 NA non-coding downstream 65161 43980445 ~ 43980721 (+)
G261381 NA non-coding downstream 65529 43980813 ~ 43981076 (+)
G261382 NA non-coding downstream 65971 43981255 ~ 43981580 (+)
G261383 NA non-coding downstream 66389 43981673 ~ 43982138 (+)
LOC110519969 LOC106586020 other upstream 3462875 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 4246967 39658753 ~ 39668297 (+)
G254816 NA other upstream 5070499 38843510 ~ 38844556 (+)
G254445 NA other upstream 5314189 38600487 ~ 38600866 (+)
G254204 NA other upstream 5473321 38441166 ~ 38441734 (+)
G261749 NA other downstream 336785 44252069 ~ 44252551 (+)
G262037 NA other downstream 605135 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 1923637 45838921 ~ 45839480 (+)
G263710 NA other downstream 2018835 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 2160200 46075484 ~ 46079425 (+)

Expression


Co-expression Network