Gene
RNA
| Item | Value |
|---|---|
| gene id | G261680 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 44147036 ~ 44147273 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: histone deacetylase 4 isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU297670 | True | 238 | lncRNA | 0.49 | 1 | 44147036 | 44147273 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118956029 | NA | coding | downstream | 405234 | 43706881 ~ 43741802 (-) |
| LOC110519993 | LOC106586116 | coding | downstream | 520866 | 43521331 ~ 43626170 (-) |
| LOC110519985 | LOC106586111 | coding | downstream | 1095622 | 43015700 ~ 43051414 (-) |
| LOC110519987 | LOC106586109 | coding | downstream | 1142979 | 42946744 ~ 43004057 (-) |
| LOC118955837 | NA | coding | downstream | 1529860 | 42592366 ~ 42617176 (-) |
| LOC110519998 | LOC106586121 | coding | upstream | 84726 | 44231999 ~ 44235888 (-) |
| LOC118956139 | NA | coding | upstream | 111896 | 44259169 ~ 44262998 (-) |
| LOC110519999 | LOC106586089 | coding | upstream | 143553 | 44290826 ~ 44294051 (-) |
| LOC110520000 | NA | coding | upstream | 278095 | 44425368 ~ 44468711 (-) |
| LOC110520004 | LOC106586125 | coding | upstream | 376437 | 44523710 ~ 44718478 (-) |
| G261678 | NA | non-coding | downstream | 1023 | 44145775 ~ 44146013 (-) |
| G261649 | NA | non-coding | downstream | 47986 | 44098455 ~ 44099050 (-) |
| G261579 | LOC106611080 | non-coding | downstream | 158915 | 43986541 ~ 43988121 (-) |
| G261335 | NA | non-coding | downstream | 227574 | 43919148 ~ 43919462 (-) |
| G261326 | NA | non-coding | downstream | 234109 | 43912719 ~ 43912927 (-) |
| G261711 | NA | non-coding | upstream | 54575 | 44201848 ~ 44217315 (-) |
| G261710 | NA | non-coding | upstream | 58198 | 44205471 ~ 44208071 (-) |
| G261779 | NA | non-coding | upstream | 89145 | 44236418 ~ 44236621 (-) |
| G261781 | NA | non-coding | upstream | 92064 | 44239337 ~ 44239566 (-) |
| G261792 | NA | non-coding | upstream | 104893 | 44252166 ~ 44252426 (-) |
| G261580 | NA | other | downstream | 115531 | 43989524 ~ 44031505 (-) |
| G259576 | LOC106599288 | other | downstream | 1819041 | 42285630 ~ 42327995 (-) |
| G259579 | LOC106586070 | other | downstream | 1827651 | 42290259 ~ 42319385 (-) |
| col6a3 | LOC106598405 | other | downstream | 1831678 | 42291728 ~ 42329627 (-) |
| G259259 | sdpr | other | downstream | 2379448 | 41763817 ~ 41767588 (-) |
| G262993 | NA | other | upstream | 862899 | 45010172 ~ 45012249 (-) |
| LOC110520012 | cssa21h2orf88 | other | upstream | 952067 | 45099333 ~ 45104286 (-) |
| G263274 | NA | other | upstream | 1389059 | 45536332 ~ 45537542 (-) |
| G265988 | NA | other | upstream | 3451945 | 47599218 ~ 47599815 (-) |
| LOC110505248 | gcg | other | upstream | 3884774 | 48032036 ~ 48033434 (-) |
