G261860


Basic Information

Item Value
gene id G261860
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 44318487 ~ 44318760 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU297858
gttttgatagccttcagccgcaccctcatactactccttctctgttccgcgggtgatgtggaggtaaacccaggccctgcatgtccccaggcaccctcatttgttgacttctgtgatcgaaaaagccttggtttcatgcatgtcaacatcagaagcctcctccctaagtttgtcttactcactgctctagcacactctgctaaccctgatgtccttgccgtgtctgaatcctggctcaggaaggccaccaaaaattctgagatttccatacccg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297858 True 274 lncRNA 0.51 1 44318487 44318760

Neighbor

gene id symbol gene type direction distance location
LOC110504116 LOC106586120 coding upstream 110382 44075822 ~ 44208107 (+)
LOC118956122 NA coding upstream 331529 43943124 ~ 43986958 (+)
LOC110519997 lct coding upstream 422839 43876264 ~ 43895648 (+)
LOC110519995 LOC106586118 coding upstream 442667 43857089 ~ 43875820 (+)
LOC110519994 LOC100380648 coding upstream 472858 43830961 ~ 43845629 (+)
LOC110520002 LOC106586124 coding downstream 151411 44470171 ~ 44475272 (+)
LOC118964364 NA coding downstream 515751 44834511 ~ 44834565 (+)
cd18 cd18 coding downstream 559900 44878660 ~ 44903676 (+)
LOC110520005 LOC106586127 coding downstream 585274 44904034 ~ 44930884 (+)
LOC110520010 LOC106586134 coding downstream 670348 44989108 ~ 45010624 (+)
G261739 NA non-coding upstream 78984 44239177 ~ 44239503 (+)
G261738 NA non-coding upstream 79429 44238258 ~ 44239058 (+)
G261725 NA non-coding upstream 92252 44225953 ~ 44226235 (+)
G261386 LOC106581475 non-coding upstream 286882 43989838 ~ 44031605 (+)
G261862 NA non-coding downstream 34 44318794 ~ 44319156 (+)
G261865 NA non-coding downstream 2125 44320885 ~ 44321111 (+)
G261870 NA non-coding downstream 4546 44323306 ~ 44323542 (+)
G261872 NA non-coding downstream 7231 44325991 ~ 44326223 (+)
G261888 NA non-coding downstream 27239 44345999 ~ 44346321 (+)
G261749 NA other upstream 65936 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 3866307 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 4650399 39658753 ~ 39668297 (+)
G254816 NA other upstream 5473931 38843510 ~ 38844556 (+)
G254445 NA other upstream 5717621 38600487 ~ 38600866 (+)
G262037 NA other downstream 201659 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 1520161 45838921 ~ 45839480 (+)
G263710 NA other downstream 1615359 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 1756724 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 1865374 46184134 ~ 46184804 (+)

Expression


Co-expression Network