G261870


Basic Information

Item Value
gene id G261870
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 44323306 ~ 44323542 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU297868
atccaattggttgagtagggtattggaggctattttgtaaatgacatcgccaaagtcgaggattggtaggatggtcagttttacaagggtatgtttggcagcatgagtgaaggatgctttgttgcgaaataggaagccaattctagatttaactttggattgaagatgtttgatatgggtctggaaggagagtttacagtctaaccagacacctaagtatttgtagttgtccacgta

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297868 True 237 lncRNA 0.41 1 44323306 44323542

Neighbor

gene id symbol gene type direction distance location
LOC110504116 LOC106586120 coding upstream 115201 44075822 ~ 44208107 (+)
LOC118956122 NA coding upstream 336348 43943124 ~ 43986958 (+)
LOC110519997 lct coding upstream 427658 43876264 ~ 43895648 (+)
LOC110519995 LOC106586118 coding upstream 447486 43857089 ~ 43875820 (+)
LOC110519994 LOC100380648 coding upstream 477677 43830961 ~ 43845629 (+)
LOC110520002 LOC106586124 coding downstream 146629 44470171 ~ 44475272 (+)
LOC118964364 NA coding downstream 510969 44834511 ~ 44834565 (+)
cd18 cd18 coding downstream 555118 44878660 ~ 44903676 (+)
LOC110520005 LOC106586127 coding downstream 580492 44904034 ~ 44930884 (+)
LOC110520010 LOC106586134 coding downstream 665566 44989108 ~ 45010624 (+)
G261865 NA non-coding upstream 2195 44320885 ~ 44321111 (+)
G261862 NA non-coding upstream 4150 44318794 ~ 44319156 (+)
G261860 NA non-coding upstream 4546 44318487 ~ 44318760 (+)
G261739 NA non-coding upstream 83803 44239177 ~ 44239503 (+)
G261738 NA non-coding upstream 84248 44238258 ~ 44239058 (+)
G261872 NA non-coding downstream 2449 44325991 ~ 44326223 (+)
G261888 NA non-coding downstream 22457 44345999 ~ 44346321 (+)
G261908 NA non-coding downstream 43670 44367212 ~ 44367436 (+)
G261957 NA non-coding downstream 86363 44409905 ~ 44410141 (+)
G261971 NA non-coding downstream 94565 44418107 ~ 44420220 (+)
G261749 NA other upstream 70755 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 3871126 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 4655218 39658753 ~ 39668297 (+)
G254816 NA other upstream 5478750 38843510 ~ 38844556 (+)
G254445 NA other upstream 5722440 38600487 ~ 38600866 (+)
G262037 NA other downstream 196877 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 1515379 45838921 ~ 45839480 (+)
G263710 NA other downstream 1610577 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 1751942 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 1860592 46184134 ~ 46184804 (+)

Expression


Co-expression Network