G261871



Basic Information


Item Value
gene id G261871
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 44323749 ~ 44323974 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU297869
atcggcagactcgacagccttggtttctcaaatgattgcctcgcctggttcaccaactacttctctgatagagttcagtgtgtcaaatcggagggtctgctgtccggacctctggcagtctctatgggggtgccacagggtttaattcttggaccgactctcttctctgtatacatcaatgaggtcgctcttgctgctggtgagtctctgatccacctctatgcag

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU297869 True 226 lncRNA 0.51 1 44323749 44323974

Neighbor


gene id symbol gene type direction distance location
LOC110519999 LOC106586089 coding downstream 29698 44290826 ~ 44294051 (-)
LOC118956139 NA coding downstream 60751 44259169 ~ 44262998 (-)
LOC110519998 LOC106586121 coding downstream 87861 44231999 ~ 44235888 (-)
LOC118956029 NA coding downstream 581947 43706881 ~ 43741802 (-)
LOC110519993 LOC106586116 coding downstream 697579 43521331 ~ 43626170 (-)
LOC110520000 NA coding upstream 101394 44425368 ~ 44468711 (-)
LOC110520004 LOC106586125 coding upstream 199736 44523710 ~ 44718478 (-)
LOC118956426 NA coding upstream 614761 44938735 ~ 44940312 (-)
LOC110520006 LOC106581857 coding upstream 617385 44941359 ~ 44957343 (-)
LOC110520007 NA coding upstream 620747 44944721 ~ 44947818 (-)
G261868 NA non-coding downstream 1608 44321941 ~ 44322141 (-)
G261867 NA non-coding downstream 1999 44321443 ~ 44321750 (-)
G261866 NA non-coding downstream 2415 44320963 ~ 44321334 (-)
G261863 NA non-coding downstream 4569 44318942 ~ 44319180 (-)
G261861 NA non-coding downstream 4989 44318555 ~ 44318760 (-)
G261875 NA non-coding upstream 6977 44330951 ~ 44331171 (-)
G261924 NA non-coding upstream 55115 44379089 ~ 44379292 (-)
G261950 NA non-coding upstream 82435 44406409 ~ 44406656 (-)
G262325 NA non-coding upstream 93966 44417940 ~ 44420223 (-)
G262326 NA non-coding upstream 98517 44422491 ~ 44423077 (-)
G261580 NA other downstream 292244 43989524 ~ 44031505 (-)
G259576 LOC106599288 other downstream 1995754 42285630 ~ 42327995 (-)
G259579 LOC106586070 other downstream 2004364 42290259 ~ 42319385 (-)
col6a3 LOC106598405 other downstream 2008391 42291728 ~ 42329627 (-)
G259259 sdpr other downstream 2556161 41763817 ~ 41767588 (-)
G262993 NA other upstream 686198 45010172 ~ 45012249 (-)
LOC110520012 cssa21h2orf88 other upstream 775366 45099333 ~ 45104286 (-)
G263274 NA other upstream 1212358 45536332 ~ 45537542 (-)
G265988 NA other upstream 3275244 47599218 ~ 47599815 (-)
LOC110505248 gcg other upstream 3708073 48032036 ~ 48033434 (-)

Expression



Co-expression Network