G261972


Basic Information

Item Value
gene id G261972
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 44422491 ~ 44423084 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU297974
tggccacgactgtagaagATAATGACATAGGCAGTGACATCACTAGGGCTGGACTTAAAATAACTTGGGACATTTTCTTTGATGCAGAACTTACTTGTAAACATGCATTACGTTCCTGTTGTCAACATATGTCTGCAATTTAattaataaaggtttttgaaTGATGTAATTGAAGATATTGTCACAATGCTAATTTAACCAATGAgacaatgattgacaaggaacaaaGAAACTAACCTTAacagggtgctttgctggtgaaactgtctgtgatttatttagaattcaaggcacacttaaccagcatggctaccacagcattctgcagcgatacgccatccaatctggtttgggcttagtgggactatcatttgtttttcaacaggacaataacccaacacacctccaggctgtgttagggctatttgaccaagaaggagagtgatgcatcaggtgacctggccttcacaatcccctgaactcaaccaaattgagatggtttttgatgagttggaccgcagagtgaaggaaaagcagccaacaagagctcagcatatgtgggaactccttcaagactgttggaaaaacattcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297974 True 594 lncRNA 0.41 1 44422491 44423084

Neighbor

gene id symbol gene type direction distance location
LOC110504116 LOC106586120 coding upstream 214386 44075822 ~ 44208107 (+)
LOC118956122 NA coding upstream 435533 43943124 ~ 43986958 (+)
LOC110519997 lct coding upstream 526843 43876264 ~ 43895648 (+)
LOC110519995 LOC106586118 coding upstream 546671 43857089 ~ 43875820 (+)
LOC110519994 LOC100380648 coding upstream 576862 43830961 ~ 43845629 (+)
LOC110520002 LOC106586124 coding downstream 47087 44470171 ~ 44475272 (+)
LOC118964364 NA coding downstream 411427 44834511 ~ 44834565 (+)
cd18 cd18 coding downstream 455576 44878660 ~ 44903676 (+)
LOC110520005 LOC106586127 coding downstream 480950 44904034 ~ 44930884 (+)
LOC110520010 LOC106586134 coding downstream 566024 44989108 ~ 45010624 (+)
G261971 NA non-coding upstream 2271 44418107 ~ 44420220 (+)
G261957 NA non-coding upstream 12350 44409905 ~ 44410141 (+)
G261908 NA non-coding upstream 55055 44367212 ~ 44367436 (+)
G261888 NA non-coding upstream 76170 44345999 ~ 44346321 (+)
G261872 NA non-coding upstream 96268 44325991 ~ 44326223 (+)
G262016 NA non-coding downstream 68572 44491656 ~ 44491982 (+)
G262024 NA non-coding downstream 77259 44500343 ~ 44500597 (+)
G262028 NA non-coding downstream 84668 44507752 ~ 44508091 (+)
G262035 NA non-coding downstream 93116 44516200 ~ 44516484 (+)
G262259 NA non-coding downstream 428295 44851379 ~ 44892059 (+)
G261749 NA other upstream 169940 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 3970311 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 4754403 39658753 ~ 39668297 (+)
G254816 NA other upstream 5577935 38843510 ~ 38844556 (+)
G254445 NA other upstream 5821625 38600487 ~ 38600866 (+)
G262037 NA other downstream 97335 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 1415837 45838921 ~ 45839480 (+)
G263710 NA other downstream 1511035 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 1652400 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 1761050 46184134 ~ 46184804 (+)

Expression


Co-expression Network