G262820


Basic Information

Item Value
gene id G262820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 45242850 ~ 45243091 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU298891
AGTCCTCCCAGCACGAGTGAGGGGGCTTGCTGGTGAGTCCATCTTTTGGTGTTTCAGTGGCTTTTTTCGATAAGATAATACACTTCTCTTCAGAGTAGACTACAACAAAGTAACTGCAACCTGAGGTAGCCTACTTCTTCTTGATAGGCCTATTAATTATTTTGTCAAAcgaggacaaaaaaaaaaaatcccattagTAAATTGTCAAATAGACCTATTAACTTTTCCAGAGGTCTAAACGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU298891 True 242 lncRNA 0.39 1 45242850 45243091

Neighbor

gene id symbol gene type direction distance location
LOC110520014 ormdl1 coding upstream 33259 45191720 ~ 45209591 (+)
LOC100135920 LOC100135920 coding upstream 134263 45105779 ~ 45108587 (+)
hibch hibch coding upstream 150775 45041037 ~ 45092075 (+)
LOC110505238 NA coding upstream 207504 45028832 ~ 45035346 (+)
LOC110520010 LOC106586134 coding upstream 232226 44989108 ~ 45010624 (+)
LOC110520018 LOC106586140 coding downstream 36846 45279937 ~ 45292634 (+)
glsb LOC106586143 coding downstream 97238 45340329 ~ 45399501 (+)
LOC118956876 NA coding downstream 251218 45494309 ~ 45495980 (+)
LOC110520024 cxcr4 coding downstream 257047 45500138 ~ 45502139 (+)
dars1 sydc coding downstream 266374 45509465 ~ 45539298 (+)
G262814 NA non-coding upstream 15466 45227173 ~ 45227384 (+)
G262807 NA non-coding upstream 44248 45198350 ~ 45198602 (+)
G262735 cssa21h2orf88 non-coding upstream 140412 45100039 ~ 45102438 (+)
G262313 NA non-coding upstream 283675 44958687 ~ 44959175 (+)
G262259 NA non-coding upstream 350791 44851379 ~ 44892059 (+)
G262827 NA non-coding downstream 11106 45254197 ~ 45254448 (+)
G262875 NA non-coding downstream 92036 45335127 ~ 45335366 (+)
G262852 NA non-coding downstream 157186 45400277 ~ 45488380 (+)
G263331 NA non-coding downstream 348162 45591253 ~ 45591539 (+)
G263362 NA non-coding downstream 374047 45617138 ~ 45617349 (+)
G262037 NA other upstream 717442 44520419 ~ 44525408 (+)
G261749 NA other upstream 990299 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 4790670 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 5574762 39658753 ~ 39668297 (+)
G254816 NA other upstream 6398294 38843510 ~ 38844556 (+)
G263547 LOC106586150 other downstream 595830 45838921 ~ 45839480 (+)
G263710 NA other downstream 691028 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 832393 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 941043 46184134 ~ 46184804 (+)
LOC110520046 LOC106586167 other downstream 1587917 46801058 ~ 46832288 (+)

Expression


Co-expression Network