G263122


Basic Information

Item Value
gene id G263122
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 45294739 ~ 45296453 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU299222
TTTCTTTTTAATTCAGAGCTCATGCAAAACAAGCTGTATAAACGTCCTCCACTATAATGGAGTGTGAAGTGATTCTTGCATATTACATTTAAACAAAGATTATATCAAACAATggttttaatgtatttttacaaTGATGGGAGATTATGGACAGTATAGACCATTAGCATGTTGTATGATTTTCTTGGTTTATGCATGAGAGCATTGATTTCTACACACGAGGCAGAGAACAATTTCACAAGCAAATTGTTCAGAAAACTTCTCCATTAGCAACAACTGTTAACACTagtatataaaaacatttttaaaagttgtaaaaaaaaaaaagacttccAACATTTAAAGACGACAACATAATCTGATGTCATAAACAAAttattttacatacagtacagtgtgaaTATTGATTGACGGCCATTGTTACTTGTATGAAAAAGATATGGTATGAAATATTCCTGAATAAATGTTCTGAGAAAAAGGCTCTGTTCTGAAGAATGTGCTTAATTTACATTTTGGGGGGTAATCCATGCCAAACATTAACATTGAGCTCAGTTCCTGGCATTTCTCTATAGAACACCAGCTGCAGTTCCAAAAACCTGCAGACCTGTCTGACTCCACATCAGCCTTTAGTACAACCGCCCAGGGCTAAAGAAAGGCCTCACTGTTCTCTTCAAGTGCCGTGTCTATTCTCTCCAACCATAATATTTTCCTCACCAAATCACCTCCGTGGCGTGGCGTAGGTCAGCAATGGTTTTTCATGGGCAGAGGTAATAACCATGAAGTCTGTGCATATGACTGCAAACCTTCACAGTGGTGTTGGAGAGCTCCAAGAGCTACAAACCGACAGTTTTGCCTGGCTACAGCACAGTTGGTGTAATTGCAGTTAGTGGCCAGCTAAGACAACCTGAACATGATGACTTTCTACTGTGGCAGAGGAACACTGGCGGGGAGGTCTGCTGGACTTAGGGGGGGAAGGAAATCTGAGGTAAGCTTGGCAGGATTTTGAAAGCCGCCCACAGGAAAAAGGGTGGTATGGTTTTCCATGCTCACACCTGGTGTCTGGGTTTAGGATTGtgctgtgtgtgcatttgtgtcaAAGATTAGCGTAATGATGGCCCTTTATCATGGGCCTGCCAGTAAATGCAAAGTCCTTCAGCTCGGCCTTGTGCAAAATGCAGTAGCAATGCCTGAAGGTGTTTTCGTTATTATGGACATAGTAGAATCAGTTAAAGTGCCTGTGTAACAATCACGATTAAAAATCACCTTTGAAGACAGATAAATCAATGATGACAAACAACTACAGGTATAACAATTGCAAGGGGGGTTAGACATCTGTACACGAGGTGTCTACAAAAGCGTTAATGAGCCTATGCGAgattcattttcacttcacatCAAAAAAATAATTGGAATGCTCATAGGGAAAACAACAGGTTTTCCCTCACTTCCTTTTAAGCTGTATAAGAATATCCACTTTGGTCATTGGGAGCATTGTTAATGGGAATGCATAGTTTCCTAGTTGTTCGCTATAACTAGCATATCAGCACCACCATGGCTGAGAGACAATACTGATGATACATTGAgaatagtatatatatacagtaccagtcataagttttgacacacctactcgttccagggtttctttattttttactattttctacattgtagaataata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299222 True 1681 lncRNA 0.39 2 45294739 45296453

Neighbor

gene id symbol gene type direction distance location
si:ch211-136m16.8 LOC106586138 coding downstream 51352 45236500 ~ 45243387 (-)
LOC110520016 asnsd1 coding downstream 59712 45228250 ~ 45235027 (-)
LOC110520013 LOC106586136 coding downstream 82056 45210945 ~ 45212683 (-)
LOC118956634 NA coding downstream 94077 45197003 ~ 45200662 (-)
LOC110504133 NA coding downstream 104619 45179364 ~ 45190120 (-)
LOC110520019 LOC106586141 coding upstream 5952 45302405 ~ 45327280 (-)
LOC110520020 LOC106586142 coding upstream 103832 45400285 ~ 45432858 (-)
LOC110520023 LOC106586145 coding upstream 138503 45434956 ~ 45462768 (-)
LOC110520026 tmbi1 coding upstream 243391 45539844 ~ 45567046 (-)
si:ch1073-416j23.1 LOC106586148 coding upstream 283650 45580103 ~ 45587671 (-)
G263133 NA non-coding downstream 34540 45255713 ~ 45260199 (-)
G263127 NA non-coding downstream 45919 45244750 ~ 45248820 (-)
G263119 NA non-coding downstream 70127 45224072 ~ 45224612 (-)
G263120 NA non-coding downstream 72303 45222054 ~ 45222436 (-)
G263293 NA non-coding upstream 210793 45507246 ~ 45507568 (-)
G263273 NA non-coding upstream 235158 45531611 ~ 45570492 (-)
G263332 NA non-coding upstream 294806 45591259 ~ 45591483 (-)
G263373 NA non-coding upstream 326534 45622987 ~ 45623447 (-)
G263640 NA non-coding upstream 537853 45834306 ~ 45834950 (-)
LOC110520012 cssa21h2orf88 other downstream 190476 45099333 ~ 45104286 (-)
G262993 NA other downstream 282490 45010172 ~ 45012249 (-)
G261580 NA other downstream 1263234 43989524 ~ 44031505 (-)
G259579 LOC106586070 other downstream 2975354 42290259 ~ 42319385 (-)
G263274 NA other upstream 239879 45536332 ~ 45537542 (-)
G265988 NA other upstream 2302765 47599218 ~ 47599815 (-)
LOC110505248 gcg other upstream 2735594 48032036 ~ 48033434 (-)
G268310 NA other upstream 4199024 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 4205963 49494001 ~ 49503025 (-)

Expression


Co-expression Network