G262875


Basic Information

Item Value
gene id G262875
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 45335127 ~ 45335366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU298957
gtataaggtagttgttgggaattgttaggttataatactcgttggttattactgcattgtcggaactagaaacacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaaatttgatttgatttgaaacaccgtacacctggcgaccgtgtcagtgtgcatgcaCCAGAACCAGGATCTCACGTGGCACAGCTAGCATTGCggtacagtgccttagac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU298957 True 240 lncRNA 0.43 1 45335127 45335366

Neighbor

gene id symbol gene type direction distance location
LOC110520018 LOC106586140 coding upstream 42493 45279937 ~ 45292634 (+)
LOC110520014 ormdl1 coding upstream 125536 45191720 ~ 45209591 (+)
LOC100135920 LOC100135920 coding upstream 226540 45105779 ~ 45108587 (+)
hibch hibch coding upstream 243052 45041037 ~ 45092075 (+)
LOC110505238 NA coding upstream 299781 45028832 ~ 45035346 (+)
glsb LOC106586143 coding downstream 4963 45340329 ~ 45399501 (+)
LOC118956876 NA coding downstream 158943 45494309 ~ 45495980 (+)
LOC110520024 cxcr4 coding downstream 164772 45500138 ~ 45502139 (+)
dars1 sydc coding downstream 174099 45509465 ~ 45539298 (+)
pnkd pnkd coding downstream 214546 45549912 ~ 45561382 (+)
G262827 NA non-coding upstream 80679 45254197 ~ 45254448 (+)
G262820 NA non-coding upstream 92036 45242850 ~ 45243091 (+)
G262814 NA non-coding upstream 107743 45227173 ~ 45227384 (+)
G262807 NA non-coding upstream 136525 45198350 ~ 45198602 (+)
G262735 cssa21h2orf88 non-coding upstream 232689 45100039 ~ 45102438 (+)
G262852 NA non-coding downstream 64911 45400277 ~ 45488380 (+)
G263331 NA non-coding downstream 255887 45591253 ~ 45591539 (+)
G263362 NA non-coding downstream 281772 45617138 ~ 45617349 (+)
G263372 NA non-coding downstream 287632 45622998 ~ 45623306 (+)
G263376 NA non-coding downstream 288911 45624277 ~ 45624493 (+)
G262037 NA other upstream 809719 44520419 ~ 44525408 (+)
G261749 NA other upstream 1082576 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 4882947 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 5667039 39658753 ~ 39668297 (+)
G254816 NA other upstream 6490571 38843510 ~ 38844556 (+)
G263547 LOC106586150 other downstream 503555 45838921 ~ 45839480 (+)
G263710 NA other downstream 598753 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 740118 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 848768 46184134 ~ 46184804 (+)
LOC110520046 LOC106586167 other downstream 1495642 46801058 ~ 46832288 (+)

Expression


Co-expression Network