G263331


Basic Information

Item Value
gene id G263331
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 45591253 ~ 45591539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU299447
cttccccagatctgtgcctcaacacaatcctgtctcggagctctacggacaattcctttgatctcatggcttggtttttgctctgacatacactgtcaattgtgggaccttatatagacaggtgtgtgcctttccaaatcatgtccaatcaattgaatttaccacaggtggactccaatcaggttgtagaaaaatctcaaggatgataaatggaaacaggatacacctgagctcaatttcgagtctcatagcaaagggtctgaatacttatgtaaataaggtatttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299447 True 287 lncRNA 0.41 1 45591253 45591539

Neighbor

gene id symbol gene type direction distance location
LOC110520030 gmpaa coding upstream 11250 45571650 ~ 45580003 (+)
pnkd pnkd coding upstream 29871 45549912 ~ 45561382 (+)
dars1 sydc coding upstream 51955 45509465 ~ 45539298 (+)
LOC110520024 cxcr4 coding upstream 89114 45500138 ~ 45502139 (+)
LOC118956876 NA coding upstream 95273 45494309 ~ 45495980 (+)
asic4a LOC106586149 coding downstream 134698 45726237 ~ 45823301 (+)
LOC110504149 wnt6 coding downstream 260643 45852182 ~ 45884194 (+)
LOC110520033 LOC106586153 coding downstream 312126 45903665 ~ 45933022 (+)
LOC110520034 LOC106586154 coding downstream 416660 46008199 ~ 46010647 (+)
LOC118957146 NA coding downstream 441226 46032765 ~ 46043845 (+)
G262852 NA non-coding upstream 102873 45400277 ~ 45488380 (+)
G262875 NA non-coding upstream 255887 45335127 ~ 45335366 (+)
G262827 NA non-coding upstream 336805 45254197 ~ 45254448 (+)
G262820 NA non-coding upstream 348162 45242850 ~ 45243091 (+)
G262814 NA non-coding upstream 363869 45227173 ~ 45227384 (+)
G263362 NA non-coding downstream 25599 45617138 ~ 45617349 (+)
G263372 NA non-coding downstream 31459 45622998 ~ 45623306 (+)
G263376 NA non-coding downstream 32738 45624277 ~ 45624493 (+)
G263399 NA non-coding downstream 52654 45644193 ~ 45644394 (+)
G263453 NA non-coding downstream 97931 45689470 ~ 45689858 (+)
G262037 NA other upstream 1065845 44520419 ~ 44525408 (+)
G261749 NA other upstream 1338702 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 5139073 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 5923165 39658753 ~ 39668297 (+)
G254816 NA other upstream 6746697 38843510 ~ 38844556 (+)
G263547 LOC106586150 other downstream 247382 45838921 ~ 45839480 (+)
G263710 NA other downstream 342580 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 483945 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 592595 46184134 ~ 46184804 (+)
LOC110520046 LOC106586167 other downstream 1239469 46801058 ~ 46832288 (+)

Expression


Co-expression Network