G263376


Basic Information

Item Value
gene id G263376
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 45624277 ~ 45624493 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU299492
GGTAGCGAGAGATAAAATACATCCAATAGCTTCTGAAACATTTCAACGCGCAGATTATTTAATCCCACGTTTGAGTTTTCTATTAAAGATTAGGACAAAGTTGGAGAGACATGGATGGGTTTTATCCCTGCATTGTCTGTGTTGGTTTGTATCAGCAcgtccacatgaatgtagagaaTTGCTGTAATGAAAATAAAAGGCACAGGGATAAAGGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299492 True 217 lncRNA 0.39 1 45624277 45624493

Neighbor

gene id symbol gene type direction distance location
LOC110520030 gmpaa coding upstream 44274 45571650 ~ 45580003 (+)
pnkd pnkd coding upstream 62895 45549912 ~ 45561382 (+)
dars1 sydc coding upstream 84979 45509465 ~ 45539298 (+)
LOC110520024 cxcr4 coding upstream 122138 45500138 ~ 45502139 (+)
LOC118956876 NA coding upstream 128297 45494309 ~ 45495980 (+)
asic4a LOC106586149 coding downstream 101744 45726237 ~ 45823301 (+)
LOC110504149 wnt6 coding downstream 227689 45852182 ~ 45884194 (+)
LOC110520033 LOC106586153 coding downstream 279172 45903665 ~ 45933022 (+)
LOC110520034 LOC106586154 coding downstream 383706 46008199 ~ 46010647 (+)
LOC118957146 NA coding downstream 408272 46032765 ~ 46043845 (+)
G263372 NA non-coding upstream 971 45622998 ~ 45623306 (+)
G263362 NA non-coding upstream 6928 45617138 ~ 45617349 (+)
G263331 NA non-coding upstream 32738 45591253 ~ 45591539 (+)
G262852 NA non-coding upstream 135897 45400277 ~ 45488380 (+)
G262875 NA non-coding upstream 288911 45335127 ~ 45335366 (+)
G263399 NA non-coding downstream 19700 45644193 ~ 45644394 (+)
G263453 NA non-coding downstream 64977 45689470 ~ 45689858 (+)
G263516 NA non-coding downstream 201190 45825683 ~ 45830272 (+)
G263549 NA non-coding downstream 209142 45833635 ~ 45833881 (+)
G263548 NA non-coding downstream 209784 45834277 ~ 45836050 (+)
G262037 NA other upstream 1098869 44520419 ~ 44525408 (+)
G261749 NA other upstream 1371726 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 5172097 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 5956189 39658753 ~ 39668297 (+)
G254816 NA other upstream 6779721 38843510 ~ 38844556 (+)
G263547 LOC106586150 other downstream 214428 45838921 ~ 45839480 (+)
G263710 NA other downstream 309626 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 450991 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 559641 46184134 ~ 46184804 (+)
LOC110520046 LOC106586167 other downstream 1206515 46801058 ~ 46832288 (+)

Expression


Co-expression Network