G263399


Basic Information

Item Value
gene id G263399
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 45644193 ~ 45644394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU299515
GTCGCTTTCTGATGCTTTAACGATTGTTTTCACTGTCACAGTAGTCAGTGTCGTCAGTATCACTGATACAATGGAGAATTGGACTACTCTGTAAATGGGAAAGAAATTCAGATCGCGTTTATTCAGAAAATTACACACCTCTGCCAAAAACACTGTTTCCCAATTTAACACCCAGAAGTCCATTTTGACTATAACTCCACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299515 True 202 lncRNA 0.40 1 45644193 45644394

Neighbor

gene id symbol gene type direction distance location
LOC110520030 gmpaa coding upstream 64190 45571650 ~ 45580003 (+)
pnkd pnkd coding upstream 82811 45549912 ~ 45561382 (+)
dars1 sydc coding upstream 104895 45509465 ~ 45539298 (+)
LOC110520024 cxcr4 coding upstream 142054 45500138 ~ 45502139 (+)
LOC118956876 NA coding upstream 148213 45494309 ~ 45495980 (+)
asic4a LOC106586149 coding downstream 81843 45726237 ~ 45823301 (+)
LOC110504149 wnt6 coding downstream 207788 45852182 ~ 45884194 (+)
LOC110520033 LOC106586153 coding downstream 259271 45903665 ~ 45933022 (+)
LOC110520034 LOC106586154 coding downstream 363805 46008199 ~ 46010647 (+)
LOC118957146 NA coding downstream 388371 46032765 ~ 46043845 (+)
G263376 NA non-coding upstream 19700 45624277 ~ 45624493 (+)
G263372 NA non-coding upstream 20887 45622998 ~ 45623306 (+)
G263362 NA non-coding upstream 26844 45617138 ~ 45617349 (+)
G263331 NA non-coding upstream 52654 45591253 ~ 45591539 (+)
G262852 NA non-coding upstream 155813 45400277 ~ 45488380 (+)
G263453 NA non-coding downstream 45076 45689470 ~ 45689858 (+)
G263516 NA non-coding downstream 181289 45825683 ~ 45830272 (+)
G263549 NA non-coding downstream 189241 45833635 ~ 45833881 (+)
G263548 NA non-coding downstream 189883 45834277 ~ 45836050 (+)
G263550 NA non-coding downstream 196140 45840534 ~ 45840763 (+)
G262037 NA other upstream 1118785 44520419 ~ 44525408 (+)
G261749 NA other upstream 1391642 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 5192013 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 5976105 39658753 ~ 39668297 (+)
G254816 NA other upstream 6799637 38843510 ~ 38844556 (+)
G263547 LOC106586150 other downstream 194527 45838921 ~ 45839480 (+)
G263710 NA other downstream 289725 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 431090 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 539740 46184134 ~ 46184804 (+)
LOC110520046 LOC106586167 other downstream 1186614 46801058 ~ 46832288 (+)

Expression


Co-expression Network