Gene
RNA
| Item | Value |
|---|---|
| gene id | G263547 |
| gene name | LOC106586150 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 45838921 ~ 45839480 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| chondroitin sulfate synthase 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU299672 | True | 560 | TUCP | 0.56 | 1 | 45838921 | 45839480 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| asic4a | LOC106586149 | coding | upstream | 15620 | 45726237 ~ 45823301 (+) |
| LOC110520030 | gmpaa | coding | upstream | 258918 | 45571650 ~ 45580003 (+) |
| pnkd | pnkd | coding | upstream | 277539 | 45549912 ~ 45561382 (+) |
| dars1 | sydc | coding | upstream | 299623 | 45509465 ~ 45539298 (+) |
| LOC110520024 | cxcr4 | coding | upstream | 336782 | 45500138 ~ 45502139 (+) |
| LOC110504149 | wnt6 | coding | downstream | 12702 | 45852182 ~ 45884194 (+) |
| LOC110520033 | LOC106586153 | coding | downstream | 64185 | 45903665 ~ 45933022 (+) |
| LOC110520034 | LOC106586154 | coding | downstream | 168719 | 46008199 ~ 46010647 (+) |
| LOC118957146 | NA | coding | downstream | 193285 | 46032765 ~ 46043845 (+) |
| LOC110520040 | LOC106586160 | coding | downstream | 502368 | 46341848 ~ 46441801 (+) |
| G263548 | NA | non-coding | upstream | 2871 | 45834277 ~ 45836050 (+) |
| G263549 | NA | non-coding | upstream | 5040 | 45833635 ~ 45833881 (+) |
| G263516 | NA | non-coding | upstream | 8649 | 45825683 ~ 45830272 (+) |
| G263453 | NA | non-coding | upstream | 149063 | 45689470 ~ 45689858 (+) |
| G263399 | NA | non-coding | upstream | 194527 | 45644193 ~ 45644394 (+) |
| G263550 | NA | non-coding | downstream | 1054 | 45840534 ~ 45840763 (+) |
| G263552 | NA | non-coding | downstream | 2723 | 45842203 ~ 45842458 (+) |
| G263553 | NA | non-coding | downstream | 3374 | 45842854 ~ 45843067 (+) |
| G263554 | LOC106586150 | non-coding | downstream | 4924 | 45844404 ~ 45844841 (+) |
| G263680 | NA | non-coding | downstream | 49301 | 45888781 ~ 45889224 (+) |
| G262037 | NA | other | upstream | 1313513 | 44520419 ~ 44525408 (+) |
| G261749 | NA | other | upstream | 1586370 | 44252069 ~ 44252551 (+) |
| LOC110519969 | LOC106586020 | other | upstream | 5386741 | 40440040 ~ 40452542 (+) |
| LOC110519960 | LOC106586058 | other | upstream | 6170833 | 39658753 ~ 39668297 (+) |
| G254816 | NA | other | upstream | 6994365 | 38843510 ~ 38844556 (+) |
| G263710 | NA | other | downstream | 94639 | 45934119 ~ 45934418 (+) |
| G263733 | LOC106586158 | other | downstream | 236004 | 46075484 ~ 46079425 (+) |
| G263859 | LOC107588258 | other | downstream | 344654 | 46184134 ~ 46184804 (+) |
| LOC110520046 | LOC106586167 | other | downstream | 991528 | 46801058 ~ 46832288 (+) |
| G267358 | NA | other | downstream | 3671323 | 49510803 ~ 49512475 (+) |
