Gene
RNA
| Item | Value |
|---|---|
| gene id | G264374 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 46005751 ~ 46006032 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein wntless homolog isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU300549 | True | 282 | lncRNA | 0.33 | 1 | 46005751 | 46006032 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520032 | LOC106586150 | coding | downstream | 160707 | 45830930 ~ 45845044 (-) |
| si:ch1073-416j23.1 | LOC106586148 | coding | downstream | 418080 | 45580103 ~ 45587671 (-) |
| LOC110520026 | tmbi1 | coding | downstream | 438705 | 45539844 ~ 45567046 (-) |
| LOC110520023 | LOC106586145 | coding | downstream | 542983 | 45434956 ~ 45462768 (-) |
| LOC110520020 | LOC106586142 | coding | downstream | 572893 | 45400285 ~ 45432858 (-) |
| LOC110520035 | LOC106586155 | coding | upstream | 14938 | 46020970 ~ 46024407 (-) |
| LOC110520036 | LOC106586156 | coding | upstream | 25450 | 46031482 ~ 46034427 (-) |
| LOC110520037 | pyr5 | coding | upstream | 37908 | 46043940 ~ 46047859 (-) |
| LOC110504150 | LOC106586158 | coding | upstream | 72029 | 46078061 ~ 46335208 (-) |
| LOC110520042 | LOC106586165 | coding | upstream | 540805 | 46546837 ~ 46599080 (-) |
| G264372 | NA | non-coding | downstream | 2043 | 46002939 ~ 46003708 (-) |
| G264367 | NA | non-coding | downstream | 9870 | 45995617 ~ 45995881 (-) |
| G264356 | NA | non-coding | downstream | 15181 | 45990327 ~ 45990570 (-) |
| G264354 | NA | non-coding | downstream | 16644 | 45988725 ~ 45989107 (-) |
| G264343 | NA | non-coding | downstream | 17748 | 45966950 ~ 45988003 (-) |
| G264371 | LOC106586154 | non-coding | upstream | 2296 | 46008328 ~ 46010622 (-) |
| G264361 | NA | non-coding | upstream | 42092 | 46048124 ~ 46055954 (-) |
| G264390 | NA | non-coding | upstream | 53446 | 46059478 ~ 46059722 (-) |
| G264396 | NA | non-coding | upstream | 61869 | 46067901 ~ 46068102 (-) |
| G264398 | NA | non-coding | upstream | 63554 | 46069586 ~ 46069807 (-) |
| G263274 | NA | other | downstream | 468209 | 45536332 ~ 45537542 (-) |
| LOC110520012 | cssa21h2orf88 | other | downstream | 901488 | 45099333 ~ 45104286 (-) |
| G262993 | NA | other | downstream | 993502 | 45010172 ~ 45012249 (-) |
| G261580 | NA | other | downstream | 1974246 | 43989524 ~ 44031505 (-) |
| col6a3 | LOC106598405 | other | downstream | 3690393 | 42291728 ~ 42329627 (-) |
| G265988 | NA | other | upstream | 1593186 | 47599218 ~ 47599815 (-) |
| LOC110505248 | gcg | other | upstream | 2026015 | 48032036 ~ 48033434 (-) |
| G268310 | NA | other | upstream | 3489445 | 49495477 ~ 49495803 (-) |
| LOC118944672 | NA | other | upstream | 3496384 | 49494001 ~ 49503025 (-) |
| LOC110520112 | LOC106586230 | other | upstream | 3557816 | 49563841 ~ 49608114 (-) |
