G263769


Basic Information

Item Value
gene id G263769
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 46019689 ~ 46021765 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU299902
CTGAGGATGATGCTTTTATACAACATGGTTGACGTACTTATGCATTATGTGATAATTCGGCAAAATTAAATGTAGGCCTATGTAAAATAACATCGCACAATTTCATTCATGATATCAACTGGCATTTTTAGCCTACAATTTCAAATAAATAATTTCTACAAGGTTTAAAATTATAATTAAATAATCTATTGCTTTTTTTCATGCATAAAATGTCAAAATACAACGTATAAAAGGAAAAAACAAACGTGGTTGTTGTCAAAACTAAAGGAGATACCTGCACTGTTTCGTAGACTGCCTGTGTATGTCTAAAGTaggcttaaaggcccagtgcagtcaaaaacgtgattttcatgtgttttatacatatatataaatatattccacactatgaggttggttTATTACTGTTAAATTGTGAAAATTaggataatgcccttttagtgccCTTTTAATGTCAGGATAATGCCCTTTTAATGTCAGCctgtttggtgggatggagtattggcctacctggtgacatcaccaggcgctaaatgagttaatagaccaacaagaatgtatttatttttatttaacctttatttaactaggcaagccagttaagaacaaattcttatttacaatgacggcctaccccggccaaacccgaacgacgctgggccaattgtgcgccgccctacgggactcccaatcacagccggttgtgatacagcctggaatcaaaccagggtctgcaATGAAAGAGAGTtcaaaacctctctgccaataacagctaattttccgttttcccctccccactcagaccactcccagacagtactaacaaaattcttgcttgagaaattgctcatTGCTATTTtcttctttttgaccatttgaattgaaaacaaagacagtaaggtacttaatagttacccagaaatgatttgatattgagataaacaCGTGTGCATTGGAACCTTAAAATAACCAAGGCTATTTAAAGTGGGAGTCATCGGGGAATATATTGGCGACGACAAATCTTTATCTCCATAATGTTTTTAGACCGGCACTAATAATCCTACTTTGAAATTGGTGCACTGCAAGGCTATCTGAGAACAATTCCGTATTTATATGTTTAATTAATAGCCACGTGATGGCGCTAAAAGCACAGGCAATTTCAGAGGTGTAGGCACCAGTGTCCTGTCGAATCAAAGACCAAATAAATTGGAAAGAAAAGGGTTCTTAATCTGGGTTTAGTCTAAAATACACAGCCTATCTGAAAACGCATGTTATTACATTTGAAATATTGCACAAAATGTTTAATGAATTGCGCCTTGGCATATTCAGTTAGGATCAGACAATGTCTTGGGTTCACAAGATAACATTTCGAAAGGAAAAATCATCATTAGGCCTAATCCAAAAAGGCACGCTTTTAACTACATCAATCGTCAATAATTATGATTAGGCCTCATTGGTGGATTAATAGTAGTCAATTGTAGTGGTTATTGATATTATTCaggttgttgatgttgttgacaCAGTTGATGTGCGAAGCGGACACAGCACCAAATGGTCCCGGGGGTTGGAGGTTGTGACTGTGGTAGAGAGTGGGTGGCGAACCCGGCCAATAGGAGAATCCGGACGGACCAACGCCTGGACCAACGAGGCTTAGCTTGGAAATCCCTGAAAAGGGAATAGGGGCAAAATTACTCTGGAATTTATAAAGCGCTTGCTCTGTTGTTGAGGGTTGACACACCTGGGCCAAGCCGTGAAAGTCGAACTTGTAAGCATATCGCTTCCCATGGACCTTTGTCATGATGTTTTTGTCGTAGTAGTACCGCAATGCGCGGCTGAGTTTGTCGTAGTTCATGTTGGGCTTGCTTTTGCGCTCGCCCCATCGCCGGGCCACCTCATCCGGGTCAATTAGCTTGAATTCTCCGTTCGTCCCTTCCCAGGTAATGCAGGACATGTTGGCGCTGTCTGACAGGAGTTCGAGGAGAAACTGCCATAGCTGAATCTGTCCACTACCTATTCA

Function

NR:

description
protein FEV-like isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU299902 True 2017 lncRNA 0.40 2 46019689 46021765

Neighbor

gene id symbol gene type direction distance location
LOC110520034 LOC106586154 coding upstream 9042 46008199 ~ 46010647 (+)
LOC110520033 LOC106586153 coding upstream 86667 45903665 ~ 45933022 (+)
LOC110504149 wnt6 coding upstream 135495 45852182 ~ 45884194 (+)
asic4a LOC106586149 coding upstream 196388 45726237 ~ 45823301 (+)
LOC110520030 gmpaa coding upstream 439686 45571650 ~ 45580003 (+)
LOC118957146 NA coding downstream 11000 46032765 ~ 46043845 (+)
LOC110520040 LOC106586160 coding downstream 320083 46341848 ~ 46441801 (+)
LOC110504152 LOC106586162 coding downstream 436825 46458590 ~ 46544295 (+)
LOC110520045 LOC106586166 coding downstream 702290 46724055 ~ 46777392 (+)
LOC110520046 LOC106586167 coding downstream 779293 46801058 ~ 46832288 (+)
G263764 NA non-coding upstream 7229 46012233 ~ 46012460 (+)
G263763 NA non-coding upstream 7469 46012021 ~ 46012220 (+)
G263760 NA non-coding upstream 15576 46003868 ~ 46004113 (+)
G263758 NA non-coding upstream 17110 46002349 ~ 46002579 (+)
G263757 NA non-coding upstream 18081 46001388 ~ 46001608 (+)
G263732 NA non-coding downstream 26284 46048049 ~ 46056003 (+)
G263798 NA non-coding downstream 62611 46084376 ~ 46085016 (+)
G263837 NA non-coding downstream 136284 46158049 ~ 46158282 (+)
G263842 NA non-coding downstream 141775 46163540 ~ 46163769 (+)
G263843 LOC106581831 non-coding downstream 142136 46163901 ~ 46164207 (+)
G263710 NA other upstream 85271 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 180209 45838921 ~ 45839480 (+)
G262037 NA other upstream 1494281 44520419 ~ 44525408 (+)
G261749 NA other upstream 1767138 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 5567509 40440040 ~ 40452542 (+)
G263733 LOC106586158 other downstream 53719 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 162369 46184134 ~ 46184804 (+)
G267358 NA other downstream 3489038 49510803 ~ 49512475 (+)
G267381 NA other downstream 3532733 49554498 ~ 49555838 (+)

Expression


Co-expression Network