G264361


Basic Information

Item Value
gene id G264361
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 46048124 ~ 46055954 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU300536
tttcattcggttcttaaggaaccagcagaaaagagcgcagataacagagtgcacatgtctcatatacagaacagaaagtaggttgattctagaagatcgggtcttcgggttggttcaggctgaggtgtagtcttcttggattggccctgttgggccgtccgtcatccctctgagtcttgttctttgtcacacaatgttcagctaaaaaggagattaggtgtgtgcgctgtcctcagtcacacaatgttcggctagaaaggagattaggtgtgtgcgctggtttctgcaagtcaaggctgtctcttcctcccaatgtgtgggtgtatgtcttatctgtgtgtcctcggcagttagtgtgtgtaatgtgt
>TU300534
tttcattcggttcttaaggaaccagcagaaaagagcgcagataacagagtgcacatgtctcatatacagaacagaaagtaggttgattctagaagatcgggtcttcgggttggttcaggctgaggtgtagtcttcttggattggccctgttgggccgtccgtcatccctctgagtcttgttctttgtcacacaatgttcagctaaaaaggagattaggtgtgtgcgctggtttctgcaagtcaaggctgtctcttcctcccaatgtgtgggtgtatgtcttatctgtgtgtcctcggcagttagtgtgtgtaatgtgtgtgtgctgtgtgtgtgggtgtgggagctatcctgtatgggacctaacatgttttactgtgaaaatacgttgtctcagttatagcaatgtaatagcagtaggctggtcacctgcataagaaatagcacttccttacaaaTCCCTCTCTTCACGTCTCCCCAGAGACGTGACACAACCTAACTAGATCCAGACACAAAAAGAAAACTTTTCCCAGAAGGAAAAGTGTTGTGATTCCCTCTCTTCACATCTCCTAAGAGATGTGACATAAACTAGGCTAACAATTACAAAGTTGAAAATACCTTCATGTTCTCCATTCGATCCCACTATGTACTAGATTGGCTACCAGCCACCTAGGAACTTGCAACCCTCATGCCAAAAGAGAACAACAGCTCATtgaaaaacagaacaaaagaaaatgatgtgaaa

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU300536 False 368 lncRNA 0.47 2 46048124 46055954
TU300534 True 743 lncRNA 0.44 2 46055162 46055954

Neighbor

gene id symbol gene type direction distance location
LOC110520037 pyr5 coding downstream 265 46043940 ~ 46047859 (-)
LOC110520036 LOC106586156 coding downstream 13697 46031482 ~ 46034427 (-)
LOC110520035 LOC106586155 coding downstream 23717 46020970 ~ 46024407 (-)
LOC110520032 LOC106586150 coding downstream 203080 45830930 ~ 45845044 (-)
si:ch1073-416j23.1 LOC106586148 coding downstream 460453 45580103 ~ 45587671 (-)
LOC110504150 LOC106586158 coding upstream 22107 46078061 ~ 46335208 (-)
LOC110520042 LOC106586165 coding upstream 490883 46546837 ~ 46599080 (-)
rprma rprm coding upstream 662729 46718683 ~ 46721823 (-)
LOC110520047 LOC106586168 coding upstream 945853 47001807 ~ 47007117 (-)
LOC110520049 LOC106586170 coding upstream 1082412 47138366 ~ 47145477 (-)
G264371 LOC106586154 non-coding downstream 37502 46008328 ~ 46010622 (-)
G264374 NA non-coding downstream 42092 46005751 ~ 46006032 (-)
G264372 NA non-coding downstream 44416 46002939 ~ 46003708 (-)
G264367 NA non-coding downstream 52243 45995617 ~ 45995881 (-)
G264356 NA non-coding downstream 57554 45990327 ~ 45990570 (-)
G264390 NA non-coding upstream 3524 46059478 ~ 46059722 (-)
G264396 NA non-coding upstream 11947 46067901 ~ 46068102 (-)
G264398 NA non-coding upstream 13632 46069586 ~ 46069807 (-)
G264400 NA non-coding upstream 15580 46071534 ~ 46071818 (-)
G264362 NA non-coding upstream 19530 46075484 ~ 46077573 (-)
G263274 NA other downstream 510582 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 943861 45099333 ~ 45104286 (-)
G262993 NA other downstream 1035875 45010172 ~ 45012249 (-)
G261580 NA other downstream 2016619 43989524 ~ 44031505 (-)
col6a3 LOC106598405 other downstream 3732766 42291728 ~ 42329627 (-)
G265988 NA other upstream 1543264 47599218 ~ 47599815 (-)
LOC110505248 gcg other upstream 1976093 48032036 ~ 48033434 (-)
G268310 NA other upstream 3439523 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 3446462 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 other upstream 3507894 49563841 ~ 49608114 (-)

Expression


Co-expression Network