G264362


Basic Information

Item Value
gene id G264362
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 46075484 ~ 46077573 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU300537
tttgggctgcaatctgaggtgcagttaactgtaacgtattctctgcagcagaggtaactctgggtcttcctttcctgtggcggtagtcatgagagccagtttcatcaaagccgttgatggtttttgcgactgcacttgagaaAACTTTCCAAGTTCTTGAaactttccagattgactgaccttcatgtcttaaagtaatgatgggctgttgtTTCATTTTGCtaatttgagatgttcttgccataatatggacttggtcttttaccaaatagggctatcttctgtataccatccctaccttgtcacaacacaactgattggcacaaacgcattaagaaggaagaaattccacaaattaacttttaacacggCACACCTGTtgtttgaaatgtattccaggtgactaactcatgaagcttggttgagagaataccaagagtgtgcaaagctgtcagaaatgtccagatcaactagcccatgtcagctagcgtTTTTATATTTAGGTTTTTTTAGCCCAATTTctttgtcactcaaatatcaaatgaatacacattagacatagCAACACATATAGAACTGAAAAAAATAATGTTCTTTGCAACcctatgacaaaatgtgtagaattgaaggaaataagctttaaacctgcaaaatgCTCTCTACCAATAAGAGGGGTGTTGAACAgtttgtcatgaacagtgcttgtgcacATAGAAATAGATGTGGCAGGATGTTCCCCATTACTTGGAAGGGGGGGGCAGAGtgaaaaaggtttgggaacccccTGCCTTAGAGTGTGCATAATGTGTAGATATAGTATAATGCCTATTTTTCCAATTGTGAGATTTGGGGTATGAATGAAAGAATCTATCACATCACATTATGCTGCATTTTTGTGTCAGTACATATCTGTCACCTCCATGATCATttcaaatgtgttttgttggttcaCTCATGTTCATTTAAGAGACCACTCATAAGACTCAAGTTCAGTTGTAATTGAATGTTCAAAACTACTTCTGGAAGGACCTGCTGCAAACTTCGATCCAAATCGGCAGTGCACATAAGTGTTGTATATTTCTGTTCTCAGACCCAAATCGTTTTACAATAAGTCTTCACattttgatgggggggggggtaattcaTTTCTAGTGCTTCTTGTCTGCCATTTACTCAATAGGATTGTTTGCTTGTGCGATGAGCACTGACGGGTCTAGAACACTGATTGAGCACTTAATGTAGGATAGCCTAGTCCCAACAGTGTAGGATTTGAAAATCCAGcctttattttacttttttttttttttttaagtattgtttGTTATTTAAGTATTAGAACTGgtaacttgatttgatttgatgtctttGTTTATTTATTCTTATTATGAAACGATATTTGTTTCTAACTTTTTGCTACAGCGGCCGCAGAGCATCATGCTTATCATTGACAAGTGGCATGCTGTGACGTGCAGTCACACATGCTGTGTACATCAACAGGCTCTAAGTGtgtatcctaaatggcaccctattccctacgtagtgcactgcttttgaccaggggcccatagcactggtcaaacgtagtgcactataggcaataggctgccatttgggaagcacgtTAAGCATTCCTGTGGGTAATGATGTACGAGTATGTAAGACTCTcagcattttttttcttcatgaaTTGTGAAGAATGGTCTTTTTCATCAATCACTTAAAGTATTACGCTGATCGTAATGGCATTGAAACGGCAACTCATAAACAACCATATGTATATATCGAACCAAACACAACGCTGATAGTATGCTCCACTGTACAACACTTCAAACCTACCACTGAGCAAATTGGTGTATCAGCCTCGCTTCCTGTTGGCAAGATGCAGTAATACTATTTCTACCTAAAACTGGGTGGTAAAAATGCTTATAGTTCaatacagtagcctatgctttcTTCAAAAAACATCATTTCCTGTGCTATAGCACATCATTGTACATAAGTCTGTGTGTACAAATGATACCAGGCATGTCCTTTCTTACACCATTggggctgtttgtttgttacttaatgtttaataataaaaaaagtgC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300537 True 2090 lncRNA 0.39 1 46075484 46077573

Neighbor

gene id symbol gene type direction distance location
LOC110520037 pyr5 coding downstream 27625 46043940 ~ 46047859 (-)
LOC110520036 LOC106586156 coding downstream 41057 46031482 ~ 46034427 (-)
LOC110520035 LOC106586155 coding downstream 51077 46020970 ~ 46024407 (-)
LOC110520032 LOC106586150 coding downstream 230440 45830930 ~ 45845044 (-)
si:ch1073-416j23.1 LOC106586148 coding downstream 487813 45580103 ~ 45587671 (-)
LOC110504150 LOC106586158 coding upstream 488 46078061 ~ 46335208 (-)
LOC110520042 LOC106586165 coding upstream 469264 46546837 ~ 46599080 (-)
rprma rprm coding upstream 641110 46718683 ~ 46721823 (-)
LOC110520047 LOC106586168 coding upstream 924234 47001807 ~ 47007117 (-)
LOC110520049 LOC106586170 coding upstream 1060793 47138366 ~ 47145477 (-)
G264400 NA non-coding downstream 3666 46071534 ~ 46071818 (-)
G264398 NA non-coding downstream 5677 46069586 ~ 46069807 (-)
G264396 NA non-coding downstream 7382 46067901 ~ 46068102 (-)
G264390 NA non-coding downstream 15762 46059478 ~ 46059722 (-)
G264361 NA non-coding downstream 19530 46048124 ~ 46055954 (-)
G264403 NA non-coding upstream 2462 46080035 ~ 46080283 (-)
G264360 NA non-coding upstream 11930 46089503 ~ 46090878 (-)
G264412 NA non-coding upstream 26016 46103589 ~ 46104204 (-)
G264439 NA non-coding upstream 81407 46158980 ~ 46159180 (-)
G264445 NA non-coding upstream 88898 46166471 ~ 46166781 (-)
G263274 NA other downstream 537942 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 971221 45099333 ~ 45104286 (-)
G262993 NA other downstream 1063235 45010172 ~ 45012249 (-)
G261580 NA other downstream 2043979 43989524 ~ 44031505 (-)
col6a3 LOC106598405 other downstream 3760126 42291728 ~ 42329627 (-)
G265988 NA other upstream 1521645 47599218 ~ 47599815 (-)
LOC110505248 gcg other upstream 1954474 48032036 ~ 48033434 (-)
G268310 NA other upstream 3417904 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 3424843 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 other upstream 3486275 49563841 ~ 49608114 (-)

Expression


Co-expression Network