G263733 (LOC106586158)


Basic Information

Item Value
gene id G263733
gene name LOC106586158
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 46075484 ~ 46079425 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU299866
GcactttttttattattaaacattaagtaacaaacaaacagccccAATGGTGTAAGAAAGGACATGCCTGGTATCATTTGTACACACAGACTTATGTACAATGATGTGCTATAGCACAGGAAATGATGTTTTTTGAAgaaagcataggctactgtattGAACTATAAGCATTTTTACCACCCAGTTTTAGGTAGAAATAGTATTACTGCATCTTGCCAACAGGAAGCGAGGCTGATACACCAATTTGCTCAGTGGTAGGTTTGAAGTGTTGTACAGTGGAGCATACTATCAGCGTTGTGTTTGGTTCGATATATACATATGGTTGTTTATGAGTTGCCGTTTCAATGCCATTACGATCAGCGTAATACTTTAAGTGATTGATGAAAAAGACCATTCTTCACAAttcatgaagaaaaaaaatgctgAGAGTCTTACATACTCGTACATCATTACCCACAGGAATGCTTAacgtgcttcccaaatggcagcctattgcctatagtgcactacgtttgaccagtgctatgggcccctggtcaaaagcagtgcactacgtagggaatagggtgccatttaggatacaCACTTAGAGCCTGTTGATGTACACAGCATGTGTGACTGCACGTCACAGCATGCCACTTGTCAATGATAAGCATGATGCTCTGCGGCCGCTGTAGCAAAAAGTTAGAAACAAATATCGTTTCATAATAAGAATAAATAAACaaagacatcaaatcaaatcaagttacCAGTTCTAATACTTAAATAACaaacaatacttaaaaaaaaaaaaaaaagtaaaataaaggCTGGATTTTCAAATCCTACACTGTTGGGACTAGGCTATCCTACATTAAGTGCTCAATCAGTGTTCTAGACCCGTCAGTGCTCATCGCACAAGCAAACAATCCTATTGAGTAAATGGCAGACAAGAAGCACTAGAAAtgaattacccccccccccatcaaaatGTGAAGACTTATTGTAAAACGATTTGGGTCTGAGAACAGAAATATACAACACTTATGTGCACTGCCGATTTGGATCGAAGTTTGCAGCAGGTCCTTCCAGAAGTAGTTTTGAACATTCAATTACAACTGAACTTGAGTCTTATGAGTGGTCTCTTAAATGAACATGAGtgaaccaacaaaacacatttgaaATGATCATGGAGGTGACAGATATGTACTGACACAAAAATGCAGCATAATGTGATGTGATAGATTCTTTCATTCATACCCCAAATCTCACAATTGGAAAAATAGGCATTATACTATATCTACACATTATGCACACTCTAAGGCAgggggttcccaaacctttttcaCTCTGCCCCCCCCTTCCAAGTAATGGGGAACATCCTGCCACATCTATTTCTATgtgcacaagcactgttcatgacaaacTGTTCAACACCCCTCTTATTGGTAGAGAGcattttgcaggtttaaagcttatttccttcaattctacacattttgtcataggGTTGCAAAGAACATTATTTTTTTCAGTTCTATATGTGTTGctatgtctaatgtgtattcatttgatatttgagtgacaaagAAATTGGGCTAAAAAAACCTAAATATAAAAacgctagctgacatgggctagttgatctggacatttctgacagctttgcacactcttggtattctctcaaccaagcttcatgagttagtcacctggaatacatttcaaacaACAGGTGTGccgtgttaaaagttaatttgtggaatttcttccttcttaatgcgtttgtgccaatcagttgtgttgtgacaaggtagggatggtatacagaagatagccctatttggtaaaagaccaagtccatattatggcaagaacatctcaaattaGCAAAATGAAacaacagcccatcattactttaagacatgaaggtcagtcaatctggaaagttTCAAGAACTTGGAAAGTTttctcaagtgcagtcgcaaaaaccatcaacggctttgatgaaactggctctcatgactaccgccacaggaaaggaagacccagagttacctctgctgcagagaatacgttacagttaactgcacctcagattgcagcccaaataaatgcttcacagagttcaagtaacagacacatctcaacatcaactgttcagaagagactgcgtgaatcaggccttcattgtcaaattgctgcaaagaaaccactactaaaggacaccaataagaagaagagacttgcttgcgccaagaaacacgagcaatggacattagaccggtagaaatctgtccttacatctgatgagtccaaatttgagatttttggttccaaccgctgggTCTTTGGAAGATgcggagtaggtgaatggatgatctccgcatgtgtggttcccaccgtgaagcatagaggatgaggtgtgatggtgcttcgCTGCtggcactgtctgtgatttatttagaattcagggcacacttaaccagcatggctaccacagcattctgcagcgatacgccatcccatctggttttagcttagtgggactatcatttgtttttcaacaggacaatgacccaaaacacatgtctaggttgtgtaagggctatttgaccaaggagagtgatggagtgctgcatcagatgacctggcctccacaatcccccgacctcaacccaattgagatggttttggatgagttggaccgcagagtgaaggtaaAGCAGCCAACAACTCCTATATGTTCCTATATTCCACCTATATGTTAttctgaagctggttgagagattgccaagagtgtgcaaagctgtcatcaaggcaaagggtggctactttgaagaatctaaaatctattttgatttgttaaacactttttttggttactacatgatttcatagttttgatgtcttcacaattattctacaatgtagaaaatagtaaaacataaatAACTTGAACTGGTATTGCTCTGCGGCCCCCTGCCgaccccacagtttgggaaccactgctccaAGCGACCAATGCTGAATATTTCTTCACATACAATAGCACTTACTCAAGTGTTAACCACGTTCTACAATAAATTACATTCAACAGTTATACTACCTCTCATAGATCTTTCTCTGATAGTTATAATTTCCAAGGATGatatttagaaatgttggcaTTTACAATAGATGGACACAACAAGAGTAATATGGCGTCTATGGCTTCATACTACAGCTCTGAAAcatctcaatcaatcaaatgtcaaTGTCTTGGCTACTGGCATTTTGAACAGACATGATATCCACATAACATGTTTGTTGACAAGTTATTATCCCCTATTCAGAGTCACATTTTCATGGGGAGCCATGTATCAATGGTCCTGTAGTACTGCTAACAGTGTGTTTTCATTCCACCTGTGTGTTGTATTCATAGGGTGTTTATAGGGTGTGTCCCATGCTACTGGTCACCAGTCCCTTGATGTTGGTGACAGGGCGCACATCGTGCAGCTGCCGCCGTCTGTCAATGAAGGAGGCCAGGCGACCAGTGTCCAGTGGGTTCTTGGAGTAGTCTCCACTGTGGGcacccacccagggatgctggaGACAGGCGGTGGCACTGGgcctcttcctggggtcctgcTGCAGGGTAGATTTGATGAAGTCCCGGGCCGCCTGACTCACTCCCTGGAAGTAGTCCTCGGGGAAGCAGAAGTCCAGCTTGCAGATGTTGACGCACGTTTCCTCTAGGCTCTCGTCCAGGAAGGGCGAGACGCCACTCAGCATGACGTAGGCCAGGACACCGGCGCTCCACACGTCCGTGCTCAGTGACACCGGGGTGCCCTGGATCAGCTCCGGAGCAGCAAACTCTGGGTTTCCCAGGAGCAGGTGGACATAACGGTGGCCAGACACCTGGACCGCATCTCCAAAGTCTATGAGCTTGATGCAGGGAACAGGCACGTGGAGATCCACCAG

Function

NR:

description
kalirin-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299866 True 3942 TUCP 0.43 1 46075484 46079425

Neighbor

gene id symbol gene type direction distance location
LOC118957146 NA coding upstream 31639 46032765 ~ 46043845 (+)
LOC110520034 LOC106586154 coding upstream 64837 46008199 ~ 46010647 (+)
LOC110520033 LOC106586153 coding upstream 142462 45903665 ~ 45933022 (+)
LOC110504149 wnt6 coding upstream 191290 45852182 ~ 45884194 (+)
asic4a LOC106586149 coding upstream 252183 45726237 ~ 45823301 (+)
LOC110520040 LOC106586160 coding downstream 262423 46341848 ~ 46441801 (+)
LOC110504152 LOC106586162 coding downstream 379165 46458590 ~ 46544295 (+)
LOC110520045 LOC106586166 coding downstream 644630 46724055 ~ 46777392 (+)
LOC110520046 LOC106586167 coding downstream 721633 46801058 ~ 46832288 (+)
LOC110504153 gpd2 coding downstream 941570 47020995 ~ 47027946 (+)
G263732 NA non-coding upstream 19481 46048049 ~ 46056003 (+)
G263769 NA non-coding upstream 53719 46019689 ~ 46021765 (+)
G263764 NA non-coding upstream 63024 46012233 ~ 46012460 (+)
G263763 NA non-coding upstream 63264 46012021 ~ 46012220 (+)
G263760 NA non-coding upstream 71371 46003868 ~ 46004113 (+)
G263798 NA non-coding downstream 4951 46084376 ~ 46085016 (+)
G263837 NA non-coding downstream 78624 46158049 ~ 46158282 (+)
G263842 NA non-coding downstream 84115 46163540 ~ 46163769 (+)
G263843 LOC106581831 non-coding downstream 84476 46163901 ~ 46164207 (+)
G263846 NA non-coding downstream 87641 46167066 ~ 46167307 (+)
G263710 NA other upstream 141066 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 236004 45838921 ~ 45839480 (+)
G262037 NA other upstream 1550076 44520419 ~ 44525408 (+)
G261749 NA other upstream 1822933 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 5623304 40440040 ~ 40452542 (+)
G263859 LOC107588258 other downstream 104709 46184134 ~ 46184804 (+)
G267358 NA other downstream 3431378 49510803 ~ 49512475 (+)
G267381 NA other downstream 3475073 49554498 ~ 49555838 (+)
G267529 NA other downstream 3757192 49836617 ~ 49855502 (+)

Expression


Co-expression Network