G264360


Basic Information

Item Value
gene id G264360
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 46089503 ~ 46090878 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU300533
CTCGGAACTGTTGGACGACAACAGGGGTCATTTTTTTCtccttattttttttttgttaatataTGTAAAGGCTTAATGAGTAATTCTCTGAAAAGAGTAAAAGGACTTTAGAGAATCATGGCTTCATGTAGAGAAGACGCACCGAGAAAATCTTACATCATTGTGGGAACTGACTGGTCTGGGCTTTGATTTCTGTTTCTAACACACGTTTTTTTACTTTTACATGTTTTGAAAAAAAGAAAGGCCTTTTGATGGACTGGGGCCTATTTCTCCAAGTGGAGAAAGTTTGTTATTGTCTATGGCAATTTGTACAGATtgtgttttttgttatttttgtgtgcatttttttttcttcatattttatttgtttaatatTATCAGATATGTTGGCAGTTTACTGtaaaaaagttaatttgttttgTTTACTGATGCGCTCTCTCCAGTACATTCCTGTATAATGTATTTTGCACTATTTAAGAGAATCCATATTAATGAAGTCAGGTTGTGCAATATAATTATAGTCACAATGTTCATCATTGTACTTGTAGTCTGACTAataattttaaatgtattttaaatatgTAAAATACAATTTTGACATGAGGAGTTTGCAAGGCAACATAAGTTGAACTTGTTTTGCGTTAGAAGATCAGTTGCATTGTTAATATTGGTAAATACTATGACACTGCACTAGTGCTGtccgggtcagctgtttgttttcccagcccgcaattgctaataacccatcagCAACTGCCCaactatatgtgataaagtgaaaatctgaggcccgcAATTGACCCTAGCCCGCTAATATAGAACTAGTgcaggcccagtgcactacttttgttaaaaatatacatttgcaaTTTATTTTCATTATTAATATTGGGGGTTTTTTTTATTCCGATTtttcagcacccctacttcctgcggctatgctgatttagatatgtttctgcttataatttctgaCACTTTGATAGGCTGTTtattagtcaacttgtctataattagatacatgcagcttctcttctgtcattctatgttgccctagaagactaaataaaccctttcTCACCAGAATGTAATAAATCGATAAAATGAATGCTTCAATCTTGTTGACGTCGGTAAAGTTTCCTGTCGTCTGCTTATCGGGGAGAGAACTCAATAACAAAAACAAATTGGAAAGATTtctgtgcaaaatgtccaaatgacatCGGTATGAACGCTTGTAAAGGAAATAGAAAGCTATGAAaacgacccaacatgtttctgataagttTTCAGTTTGGCtcggatgcatattttatgtgtttGAAATACTAAAGATAGCATCTCTACACACTGTATCTCACTGCACATTCACATTCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300533 True 1376 lncRNA 0.35 1 46089503 46090878

Neighbor

gene id symbol gene type direction distance location
LOC110520037 pyr5 coding downstream 41644 46043940 ~ 46047859 (-)
LOC110520036 LOC106586156 coding downstream 55076 46031482 ~ 46034427 (-)
LOC110520035 LOC106586155 coding downstream 65096 46020970 ~ 46024407 (-)
LOC110520032 LOC106586150 coding downstream 244459 45830930 ~ 45845044 (-)
si:ch1073-416j23.1 LOC106586148 coding downstream 501832 45580103 ~ 45587671 (-)
LOC110520042 LOC106586165 coding upstream 455959 46546837 ~ 46599080 (-)
rprma rprm coding upstream 627805 46718683 ~ 46721823 (-)
LOC110520047 LOC106586168 coding upstream 910929 47001807 ~ 47007117 (-)
LOC110520049 LOC106586170 coding upstream 1047488 47138366 ~ 47145477 (-)
LOC110520051 LOC106586171 coding upstream 1057466 47148341 ~ 47177648 (-)
G264403 NA non-coding downstream 9220 46080035 ~ 46080283 (-)
G264362 NA non-coding downstream 11930 46075484 ~ 46077573 (-)
G264400 NA non-coding downstream 17685 46071534 ~ 46071818 (-)
G264398 NA non-coding downstream 19696 46069586 ~ 46069807 (-)
G264396 NA non-coding downstream 21401 46067901 ~ 46068102 (-)
G264412 NA non-coding upstream 12711 46103589 ~ 46104204 (-)
G264439 NA non-coding upstream 68102 46158980 ~ 46159180 (-)
G264445 NA non-coding upstream 75593 46166471 ~ 46166781 (-)
G264446 NA non-coding upstream 77476 46168354 ~ 46168574 (-)
G264453 NA non-coding upstream 92450 46183328 ~ 46183561 (-)
G263274 NA other downstream 551961 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 985240 45099333 ~ 45104286 (-)
G262993 NA other downstream 1077254 45010172 ~ 45012249 (-)
G261580 NA other downstream 2057998 43989524 ~ 44031505 (-)
col6a3 LOC106598405 other downstream 3774145 42291728 ~ 42329627 (-)
G265988 NA other upstream 1508340 47599218 ~ 47599815 (-)
LOC110505248 gcg other upstream 1941169 48032036 ~ 48033434 (-)
G268310 NA other upstream 3404599 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 3411538 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 other upstream 3472970 49563841 ~ 49608114 (-)

Expression


Co-expression Network