G263843 (LOC106581831)


Basic Information

Item Value
gene id G263843
gene name LOC106581831
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 46163901 ~ 46164207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU299979
GAAATGCTCGAGGTGGTTCTTGAGTGATTCCGACACACCTAAAAACAATTCAGGGAGCGCTATGTGGGGGTGGTGTGGACACACACCTGCTCAGAGGTCTTGTAGAAGGCCACAGAAGCGTTGACCAGCTTGAGTCGATCCTCCATCTTGAGCATGAGCTGTTGCCAGTGCATGGCCACCTTCTCGGCGCAGGCCCGTATGCCGTCCGGGTCAAAATGGCCTGCCTGGAGCATGACCTCAGCCTTCTGCTGCACCTGCAGGGCACTCTGGTGCGTCTTCTGGAGGGAATTGGCATGGAAaagggact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299979 True 307 lncRNA 0.56 1 46163901 46164207

Neighbor

gene id symbol gene type direction distance location
LOC118957146 NA coding upstream 120056 46032765 ~ 46043845 (+)
LOC110520034 LOC106586154 coding upstream 153254 46008199 ~ 46010647 (+)
LOC110520033 LOC106586153 coding upstream 230879 45903665 ~ 45933022 (+)
LOC110504149 wnt6 coding upstream 279707 45852182 ~ 45884194 (+)
asic4a LOC106586149 coding upstream 340600 45726237 ~ 45823301 (+)
LOC110520040 LOC106586160 coding downstream 177641 46341848 ~ 46441801 (+)
LOC110504152 LOC106586162 coding downstream 294383 46458590 ~ 46544295 (+)
LOC110520045 LOC106586166 coding downstream 559848 46724055 ~ 46777392 (+)
LOC110520046 LOC106586167 coding downstream 636851 46801058 ~ 46832288 (+)
LOC110504153 gpd2 coding downstream 856788 47020995 ~ 47027946 (+)
G263842 NA non-coding upstream 132 46163540 ~ 46163769 (+)
G263837 NA non-coding upstream 5619 46158049 ~ 46158282 (+)
G263798 NA non-coding upstream 78885 46084376 ~ 46085016 (+)
G263732 NA non-coding upstream 107898 46048049 ~ 46056003 (+)
G263769 NA non-coding upstream 142136 46019689 ~ 46021765 (+)
G263846 NA non-coding downstream 2859 46167066 ~ 46167307 (+)
G263850 NA non-coding downstream 7528 46171735 ~ 46171955 (+)
G263852 NA non-coding downstream 9364 46173571 ~ 46173970 (+)
G263853 NA non-coding downstream 10120 46174327 ~ 46174585 (+)
G263869 NA non-coding downstream 39681 46203888 ~ 46204114 (+)
G263733 LOC106586158 other upstream 84476 46075484 ~ 46079425 (+)
G263710 NA other upstream 229483 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 324421 45838921 ~ 45839480 (+)
G262037 NA other upstream 1638493 44520419 ~ 44525408 (+)
G261749 NA other upstream 1911350 44252069 ~ 44252551 (+)
G263859 LOC107588258 other downstream 19927 46184134 ~ 46184804 (+)
G267358 NA other downstream 3346596 49510803 ~ 49512475 (+)
G267381 NA other downstream 3390291 49554498 ~ 49555838 (+)
G267529 NA other downstream 3672410 49836617 ~ 49855502 (+)

Expression


Co-expression Network