Gene
RNA
| Item | Value |
|---|---|
| gene id | G263869 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 46203888 ~ 46204114 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110438040 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU300005 | True | 227 | lncRNA | 0.39 | 1 | 46203888 | 46204114 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118957146 | NA | coding | upstream | 160043 | 46032765 ~ 46043845 (+) |
| LOC110520034 | LOC106586154 | coding | upstream | 193241 | 46008199 ~ 46010647 (+) |
| LOC110520033 | LOC106586153 | coding | upstream | 270866 | 45903665 ~ 45933022 (+) |
| LOC110504149 | wnt6 | coding | upstream | 319694 | 45852182 ~ 45884194 (+) |
| asic4a | LOC106586149 | coding | upstream | 380587 | 45726237 ~ 45823301 (+) |
| LOC110520040 | LOC106586160 | coding | downstream | 137734 | 46341848 ~ 46441801 (+) |
| LOC110504152 | LOC106586162 | coding | downstream | 254476 | 46458590 ~ 46544295 (+) |
| LOC110520045 | LOC106586166 | coding | downstream | 519941 | 46724055 ~ 46777392 (+) |
| LOC110520046 | LOC106586167 | coding | downstream | 596944 | 46801058 ~ 46832288 (+) |
| LOC110504153 | gpd2 | coding | downstream | 816881 | 47020995 ~ 47027946 (+) |
| G263853 | NA | non-coding | upstream | 29303 | 46174327 ~ 46174585 (+) |
| G263852 | NA | non-coding | upstream | 29918 | 46173571 ~ 46173970 (+) |
| G263850 | NA | non-coding | upstream | 31933 | 46171735 ~ 46171955 (+) |
| G263846 | NA | non-coding | upstream | 36581 | 46167066 ~ 46167307 (+) |
| G263843 | LOC106581831 | non-coding | upstream | 39681 | 46163901 ~ 46164207 (+) |
| G263872 | NA | non-coding | downstream | 1371 | 46205485 ~ 46205686 (+) |
| G263874 | LOC106581831 | non-coding | downstream | 3587 | 46207701 ~ 46208016 (+) |
| G263880 | NA | non-coding | downstream | 13345 | 46217459 ~ 46217660 (+) |
| G263882 | LOC106581831 | non-coding | downstream | 17127 | 46221241 ~ 46221710 (+) |
| G263883 | LOC107671282 | non-coding | downstream | 18254 | 46222368 ~ 46222615 (+) |
| G263859 | LOC107588258 | other | upstream | 19084 | 46184134 ~ 46184804 (+) |
| G263733 | LOC106586158 | other | upstream | 124463 | 46075484 ~ 46079425 (+) |
| G263710 | NA | other | upstream | 269470 | 45934119 ~ 45934418 (+) |
| G263547 | LOC106586150 | other | upstream | 364408 | 45838921 ~ 45839480 (+) |
| G262037 | NA | other | upstream | 1678480 | 44520419 ~ 44525408 (+) |
| G267358 | NA | other | downstream | 3306689 | 49510803 ~ 49512475 (+) |
| G267381 | NA | other | downstream | 3350384 | 49554498 ~ 49555838 (+) |
| G267529 | NA | other | downstream | 3632503 | 49836617 ~ 49855502 (+) |
| hoxd3a | hoxd3 | other | downstream | 3958187 | 50162278 ~ 50184327 (+) |
