Gene
RNA
| Item | Value |
|---|---|
| gene id | G263897 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 46238462 ~ 46238702 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU300036 | True | 241 | lncRNA | 0.48 | 1 | 46238462 | 46238702 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118957146 | NA | coding | upstream | 194617 | 46032765 ~ 46043845 (+) |
| LOC110520034 | LOC106586154 | coding | upstream | 227815 | 46008199 ~ 46010647 (+) |
| LOC110520033 | LOC106586153 | coding | upstream | 305440 | 45903665 ~ 45933022 (+) |
| LOC110504149 | wnt6 | coding | upstream | 354268 | 45852182 ~ 45884194 (+) |
| asic4a | LOC106586149 | coding | upstream | 415161 | 45726237 ~ 45823301 (+) |
| LOC110520040 | LOC106586160 | coding | downstream | 103146 | 46341848 ~ 46441801 (+) |
| LOC110504152 | LOC106586162 | coding | downstream | 219888 | 46458590 ~ 46544295 (+) |
| LOC110520045 | LOC106586166 | coding | downstream | 485353 | 46724055 ~ 46777392 (+) |
| LOC110520046 | LOC106586167 | coding | downstream | 562356 | 46801058 ~ 46832288 (+) |
| LOC110504153 | gpd2 | coding | downstream | 782293 | 47020995 ~ 47027946 (+) |
| G263891 | NA | non-coding | upstream | 6806 | 46231412 ~ 46231656 (+) |
| G263883 | LOC107671282 | non-coding | upstream | 15847 | 46222368 ~ 46222615 (+) |
| G263882 | LOC106581831 | non-coding | upstream | 16752 | 46221241 ~ 46221710 (+) |
| G263880 | NA | non-coding | upstream | 20802 | 46217459 ~ 46217660 (+) |
| G263874 | LOC106581831 | non-coding | upstream | 30446 | 46207701 ~ 46208016 (+) |
| G263931 | NA | non-coding | downstream | 51202 | 46289904 ~ 46290189 (+) |
| G263935 | NA | non-coding | downstream | 57444 | 46296146 ~ 46296372 (+) |
| G263937 | NA | non-coding | downstream | 62000 | 46300702 ~ 46300925 (+) |
| G263939 | NA | non-coding | downstream | 63533 | 46302235 ~ 46302454 (+) |
| G263944 | NA | non-coding | downstream | 69654 | 46308356 ~ 46308573 (+) |
| G263859 | LOC107588258 | other | upstream | 53658 | 46184134 ~ 46184804 (+) |
| G263733 | LOC106586158 | other | upstream | 159037 | 46075484 ~ 46079425 (+) |
| G263710 | NA | other | upstream | 304044 | 45934119 ~ 45934418 (+) |
| G263547 | LOC106586150 | other | upstream | 398982 | 45838921 ~ 45839480 (+) |
| G262037 | NA | other | upstream | 1713054 | 44520419 ~ 44525408 (+) |
| G267358 | NA | other | downstream | 3272101 | 49510803 ~ 49512475 (+) |
| G267381 | NA | other | downstream | 3315796 | 49554498 ~ 49555838 (+) |
| G267529 | NA | other | downstream | 3597915 | 49836617 ~ 49855502 (+) |
| hoxd3a | hoxd3 | other | downstream | 3923599 | 50162278 ~ 50184327 (+) |
