Gene
RNA
| Item | Value |
|---|---|
| gene id | G264259 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 46916418 ~ 46917336 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| rapamycin-insensitive companion of mTOR |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU300423 | True | 528 | lncRNA | 0.45 | 2 | 46916418 | 46917336 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520046 | LOC106586167 | coding | upstream | 84130 | 46801058 ~ 46832288 (+) |
| LOC110520045 | LOC106586166 | coding | upstream | 139026 | 46724055 ~ 46777392 (+) |
| LOC110504152 | LOC106586162 | coding | upstream | 372123 | 46458590 ~ 46544295 (+) |
| LOC110520040 | LOC106586160 | coding | upstream | 474617 | 46341848 ~ 46441801 (+) |
| LOC118957146 | NA | coding | upstream | 872573 | 46032765 ~ 46043845 (+) |
| LOC110504153 | gpd2 | coding | downstream | 103659 | 47020995 ~ 47027946 (+) |
| LOC110520048 | LOC106586169 | coding | downstream | 201392 | 47118728 ~ 47133302 (+) |
| LOC110520055 | cg057 | coding | downstream | 328158 | 47245494 ~ 47255098 (+) |
| LOC110520054 | LOC106586173 | coding | downstream | 338828 | 47256164 ~ 47259319 (+) |
| LOC110520056 | LOC106586174 | coding | downstream | 397881 | 47315217 ~ 47441923 (+) |
| G264255 | NA | non-coding | upstream | 5759 | 46910390 ~ 46910659 (+) |
| G264230 | NA | non-coding | upstream | 49359 | 46866837 ~ 46867059 (+) |
| G264229 | NA | non-coding | upstream | 50858 | 46865344 ~ 46865560 (+) |
| G264067 | NA | non-coding | upstream | 299012 | 46576728 ~ 46617406 (+) |
| G263962 | NA | non-coding | upstream | 578642 | 46337038 ~ 46337776 (+) |
| G264985 | NA | non-coding | downstream | 42330 | 46959666 ~ 46960010 (+) |
| G265131 | LOC106586170 | non-coding | downstream | 226234 | 47143570 ~ 47144441 (+) |
| G265135 | NA | non-coding | downstream | 227812 | 47145148 ~ 47145451 (+) |
| G265137 | NA | non-coding | downstream | 228601 | 47145937 ~ 47146332 (+) |
| G265140 | LOC106586171 | non-coding | downstream | 242206 | 47159542 ~ 47159776 (+) |
| G263859 | LOC107588258 | other | upstream | 731614 | 46184134 ~ 46184804 (+) |
| G263733 | LOC106586158 | other | upstream | 836993 | 46075484 ~ 46079425 (+) |
| G263710 | NA | other | upstream | 982000 | 45934119 ~ 45934418 (+) |
| G263547 | LOC106586150 | other | upstream | 1076938 | 45838921 ~ 45839480 (+) |
| G267358 | NA | other | downstream | 2593467 | 49510803 ~ 49512475 (+) |
| G267381 | NA | other | downstream | 2637162 | 49554498 ~ 49555838 (+) |
| G267529 | NA | other | downstream | 2919281 | 49836617 ~ 49855502 (+) |
| hoxd3a | hoxd3 | other | downstream | 3244965 | 50162278 ~ 50184327 (+) |
| LOC110520146 | ino80d | other | downstream | 3684966 | 50601983 ~ 50618761 (+) |
