G265388


Basic Information

Item Value
gene id G265388
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 47246028 ~ 47250041 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU301662
TGTAGTTACCGTTGTCACACAGTGTTTCCATATCTaacatttttttaatcaaatagaTTTAGTATTTGTATATTTAAGGCCATTTTATATACGAAAAACTAATCCAACATTTGTTTGCATAGTTCTTTCATAATGTGTGCAGTAATTGAGTACACTATTTTGGGGCGATATGCAGCTTAGAAGAGACTTACATTTTTAAAGTTAGAAACAAACTATGTTCATCCTGTATAGGCCTAAGAGCTGGCCCCTGTTCTATCAAAACCGGTAAGCAGcaacaaattatatatttttcccATATTACTTCAAACACTGTcacaattatttttgaatgaacaCAGAAATGCTGTTACcagtttctcctttgccaaaataatccatccacctgacaggtgtggcatatcaagaagctgattaaacagcataatcattacacatgtgcaccttgtactgggaataataaaaggccactctaaaatgtgcagttttgtcataacacaatgccacacatctcaagttttgaaggagcgtgcaattggcatgctgactgcaggaatgtccaccagagctgttgccagagaatttaatgttaatttctctaccataagccacctccaaagtcattttagagaatttggcagtacgtttcTTCaactgcgggatcatctgagaccagccacccagacagctgatgaaactgaggagcatTTCTGTCTgtcataaagcccttttgtggggaaaaccccattctgattggctgagcctgGGTGGATAGTGGGTAGGCCTATGTGGGTAGGCCTATGCCctaccaggcccacccatggttgcacccctgctcagtcatgtgaaatccatcaattagggcctaatgaatttagttcaattgactgatttccttatatgaactgtaactcattaaaaTCGTTTAAATTgtagcgtttatatttttgtactatatatatatatatatatgaatcttTGAGCCTATAACAAAGAGTTGTAAAGGTACCCAAGCTGCCTGGAGCTGCACTCTGCTGTGCTGTGAATTAAAAAGTATAACATTGCCATCTTGTGGATATATGGTGTAAACATTTCAATGGGGTCACTCACGTTTTCTTGAAATTGCCTGCTGCATCTTCATTCTTTCCTGATGCTAAGGACAAGTTCTCCATCTGGCTGTTAGGAGAGATCTGACAGCAAAAACAAGAAGTGTCTTGAATAGTCATTTATCATCTGGAATCACGTCAGGATTGAACACGGGGGTGAAAGATGGATTGAACACAGGATGAAGCCCCCTATTTCAGTTGGCAACATCAGCTTCTATTGGACATACTATGTCACTTTCTTCTCTATCACTGCAACTGCAAGAGAGGAATCTGATAAATCTAGAATAATCCAAATATGGTAAACGCAAGTGACAATTTGATGCTAATCAAATACATTTCAGCAACAGATGGGGACATAGCCAAAGATAGTGGTTGGTTATAAGTTCACTAGATACGGTAGGTGTTGAGTCTGAGAACTCTATCCATTGTTAGCTAATATTTGTAATGAGCTAAAAACATGTAGCTTTTCATGATATTAGGCAGGTGATATCATGCTGTCAAAAGGGAAGTCAATGTCCAAAATAATCTAAACAGGTCTGTCTGCATACTGGACTTCGAAGACCTCAGAATAACTATTAACTCAATTTATCGTAGCACAATATGATATGAACGGGGAAGTATTGTTACATTTGCTGGGTAGAGCATCATCAGAAGTGAAATTGCAAGGATTTCTCCATTCACCTTCTCTTTGTCATCAAAGTCCCTTTCCCAAGTTGACTTATTATCACTCCCAAAGGGAGCATTAGTTGACATGTAGTTTTGAAAGCTCTCGGTTGGGCTGGAAGAAAGACAAATTTACAAATGTCAAATAACCCATTATACTAATAATAGCCTTAGCCTGTATAACTGGGCTGCATTCAGCAGGACTCAACAGTGTGCAATGTTTGATACGTCAGAGACGGCGGATGTTCTGAAGAACTAGTTGAAGGATGTTGTGATAACAGTGGCCCAGAGGCTGAATGTGCATACTGTGCTCTGCATGGGTTTTGTGATATCAAATGGTAACCACGCCCATATTGATCAGCCCACACTCCACCACACCCACCAAACGGGAGCAAACACACAAAGCCTGTTGAAGAACGGTGTGCACCGTTTGGGGGAAACGTGTCATTCAGTACAAACCGCCACGCAATGTAGCAAAACATTTAACAAACTGAACACACCCCTGTTTTACAACAGGGTACAACAACCATACAACCTCAAACAAATATGAAATTTGGATGATCAATGCACACAACCCATATTGGCCTGGCTAAGTAGCCATAAATTACTAACAAACTAACTTCACAAATAGATTATTTTTTAATCCAGAGTAACCGTCATTATTCTCATCTTAATTTGCCTTTTTGGCTGTACCTTGCTTGCTCTTGAGCTTTTGGAGATCCAGAGAACCAGTTTGGAGCTTTGTAAGATGATGCAGAATTAGGTTTGGTGTCCAAATTGGTCTCCTCGTGCCACAATAAACCTCCAGTACGGCGTCCTTTagtcctctcctcaggaccattGTTAGCATCGTCAGAGAGCCCAGGAATCTGGGAAGTCGGGGCAGCTTTTGTTGAATCATCATCACCATTGCCAACGCctaaaacaaaaaacacacacaattataAAGGCTTTGCTTCAAGTTGTTGCTAGATCGTTAGCTACTTCAACTAGCTAGCACCTTCACCTGGTAACTTTACATCTTAGAGGCTTGTTAGAATAAGacgtgtaacgttagctagc

Function

NR:

description
uncharacterized protein C7orf57 homolog isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU301662 True 2828 lncRNA 0.40 2 47246028 47250041

Neighbor

gene id symbol gene type direction distance location
LOC110520052 LOC106586172 coding downstream 17365 47188482 ~ 47228663 (-)
LOC110520051 LOC106586171 coding downstream 68380 47148341 ~ 47177648 (-)
LOC110520049 LOC106586170 coding downstream 100551 47138366 ~ 47145477 (-)
LOC110520047 LOC106586168 coding downstream 238911 47001807 ~ 47007117 (-)
rprma rprm coding downstream 524205 46718683 ~ 46721823 (-)
LOC110520059 LOC106586177 coding upstream 475233 47725274 ~ 47748055 (-)
LOC110520061 NA coding upstream 499588 47749249 ~ 47848192 (-)
LOC110520063 LOC106586182 coding upstream 605675 47855716 ~ 47861197 (-)
LOC110520064 NA coding upstream 620828 47870869 ~ 47918295 (-)
LOC118958137 NA coding upstream 672694 47922735 ~ 47929805 (-)
G265393 NA non-coding downstream 84094 47161689 ~ 47161934 (-)
G265391 NA non-coding downstream 85683 47160058 ~ 47160345 (-)
G265382 NA non-coding downstream 108328 47137435 ~ 47137700 (-)
G265381 NA non-coding downstream 109206 47136607 ~ 47136822 (-)
G265543 NA non-coding upstream 166476 47416517 ~ 47418040 (-)
G265536 NA non-coding upstream 192750 47442791 ~ 47445204 (-)
G265901 NA non-coding upstream 229845 47479886 ~ 47480112 (-)
G265991 NA non-coding upstream 353803 47603844 ~ 47604053 (-)
G265992 NA non-coding upstream 354233 47604274 ~ 47604602 (-)
G263274 NA other downstream 1708486 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 2141765 45099333 ~ 45104286 (-)
G262993 NA other downstream 2233779 45010172 ~ 45012249 (-)
G261580 NA other downstream 3214523 43989524 ~ 44031505 (-)
col6a3 LOC106598405 other downstream 4930670 42291728 ~ 42329627 (-)
G265988 NA other upstream 349177 47599218 ~ 47599815 (-)
LOC110505248 gcg other upstream 782006 48032036 ~ 48033434 (-)
G268310 NA other upstream 2245436 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 2252375 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 other upstream 2313807 49563841 ~ 49608114 (-)

Expression


Co-expression Network