G266019 (LOC106586176)



Basic Information


Item Value
gene id G266019
gene name LOC106586176
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 47641403 ~ 47641662 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU302317
TTTTGGGCGATGAGCTGGGACTGTTAGAGGCGATCTGCCGCATGCGGCCACCGTGACAGCTGAGCGCCACCAGGCGGGAGATGATGGCCGTCTTGCCGAAGCCCACATTGCCCACAACCACGGCGCCGCGGCTCTCCTCGCAACCGTCGCCCTTCAGAACGTCCTCCAGCTGCTGGAAGAGCCAATCGCGGCCCACAAACACAGAGTCTGTGGTGATGCTGGGCACCTCGAACAGCAGCGGCTTGAGCATGATGTCCACC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU302317 True 260 lncRNA 0.63 1 47641403 47641662

Neighbor


gene id symbol gene type direction distance location
LOC110520052 LOC106586172 coding downstream 412740 47188482 ~ 47228663 (-)
LOC110520051 LOC106586171 coding downstream 463755 47148341 ~ 47177648 (-)
LOC110520049 LOC106586170 coding downstream 495926 47138366 ~ 47145477 (-)
LOC110520047 LOC106586168 coding downstream 634286 47001807 ~ 47007117 (-)
rprma rprm coding downstream 919580 46718683 ~ 46721823 (-)
LOC110520059 LOC106586177 coding upstream 83612 47725274 ~ 47748055 (-)
LOC110520061 NA coding upstream 107967 47749249 ~ 47848192 (-)
LOC110520063 LOC106586182 coding upstream 214054 47855716 ~ 47861197 (-)
LOC110520064 NA coding upstream 229207 47870869 ~ 47918295 (-)
LOC118958137 NA coding upstream 281073 47922735 ~ 47929805 (-)
G266016 NA non-coding downstream 3718 47637476 ~ 47637685 (-)
G265995 NA non-coding downstream 32739 47608455 ~ 47608664 (-)
G265992 NA non-coding downstream 36801 47604274 ~ 47604602 (-)
G265991 NA non-coding downstream 37350 47603844 ~ 47604053 (-)
G265901 NA non-coding downstream 161291 47479886 ~ 47480112 (-)
G266045 NA non-coding upstream 27717 47669379 ~ 47669690 (-)
G266046 NA non-coding upstream 30273 47671935 ~ 47672253 (-)
G266049 LOC106586176 non-coding upstream 34215 47675877 ~ 47676460 (-)
G266055 LOC106586176 non-coding upstream 40505 47682167 ~ 47688530 (-)
G266061 NA non-coding upstream 47974 47689636 ~ 47689849 (-)
G265988 NA other downstream 41588 47599218 ~ 47599815 (-)
G263274 NA other downstream 2103861 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 2537140 45099333 ~ 45104286 (-)
G262993 NA other downstream 2629154 45010172 ~ 45012249 (-)
G261580 NA other downstream 3609898 43989524 ~ 44031505 (-)
LOC110505248 gcg other upstream 390385 48032036 ~ 48033434 (-)
G268310 NA other upstream 1853815 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 1860754 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 other upstream 1922186 49563841 ~ 49608114 (-)
LOC110520119 NA other upstream 2225555 49867187 ~ 49871681 (-)

Expression



Co-expression Network