G266186 (LOC106586184)


Basic Information

Item Value
gene id G266186
gene name LOC106586184
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 47941508 ~ 47943184 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU302516
cccccccccatgtccctTTTCAGGTGTCCCTTTTCTTTCTACAAAAAAGGCCCTTCTGTCAGCAAGATGATTCAATATATTCAGGCTACAAGAGTGTAGACCAAACGACAAATCGGCAAATGTCATTACaccttttgttgttttgtaacaGACGTCCCTTTTCATTCATCAAATGGCACAGTGCACACAACATGTTTGGAGgctggaattattttggagtGGATAAACATGTGCAAGTAGCCTACTTTTAGATTTGTTTGACAATAAGATGAAAatatcatgactggttgtgttcatgacaATTAAAAGGGAATACATTATTTTTACCGTTAAATGACATGTTTTTTCTATATTTACTTATTCTTTCACACATAGTAGGTCCCGTGAAAAAAATGGCGACACCCCAAATGTCACAATATAAATCGCACTCTGACCCTATCACATCCTTGCATTTTGCCTGTCTGCATCATATTTGTAAACATAAATAAACAATATCTAATTATCCTCTAATGTGGATTGTATTACTAATTGTGTTAAACATGGTTACCAAGTAATGAATCTTCCGGAAGGAGCTGCTTGGGTTGTCGAAGAGATGGTTGGAAGAAGACAGGGTTTCCTCTTCCTGTTTTCTAGGAACATCCTCACCTTTCACCTCTCCTGAAGGTTGCTTAGTTGCTGCTATCAACTGAACTTTGAGTTTTGAAATCAACTGCTGCTGGTCTTCTATCTGTTTCTGAAGTTTCTGAGTGTGCCGTTGATAATATTCATTCGTCTTCTGTAGTTCCCTTTTGGCGCTGTCTCGCTCGATAGAGGCCTGGCGGTAAGCTTCAAATGCCTTGTTGAGCTGGTCTCCAATATTCCTCTCCATGCCGTGCGCTCCACGATCATTACTGACACGGCAGTCATGGGCCCTGTGGCAACATATCACACAACCAATGTTTAGGGGCACAATGCAGCATTAAAGCACATTATCACATGATTTGCTGTAAAAACGAAGTCCTCCTCGCTAATCATGAAACTGGGGCCAGTGCTTACTTCTCTTTTACGCCTGGACTTGCTAATTTTAGAAAGGTACAGTAAACATTTCAGGATGATCATAAGTGCCCTGTGTAGAAATAGCCTCTtgatgagaaagcaaaaacagcCAAAATATCTACTAAAGAAATAAATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302516 True 1171 lncRNA 0.40 3 47941508 47943184

Neighbor

gene id symbol gene type direction distance location
LOC118958137 NA coding downstream 11703 47922735 ~ 47929805 (-)
LOC110520064 NA coding downstream 23213 47870869 ~ 47918295 (-)
LOC110520063 LOC106586182 coding downstream 80311 47855716 ~ 47861197 (-)
LOC110520061 NA coding downstream 93316 47749249 ~ 47848192 (-)
LOC110520059 LOC106586177 coding downstream 193893 47725274 ~ 47748055 (-)
LOC110505248 gcg coding upstream 88852 48032036 ~ 48033434 (-)
fap LOC106586187 coding upstream 90565 48033749 ~ 48045947 (-)
LOC110504154 ifih1 coding upstream 102524 48045708 ~ 48059730 (-)
LOC118958229 NA coding upstream 122309 48065493 ~ 48066503 (-)
LOC118958240 LOC106586190 coding upstream 135917 48079101 ~ 48097689 (-)
G266182 NA non-coding downstream 20364 47920869 ~ 47921144 (-)
G266169 NA non-coding downstream 49929 47890398 ~ 47891579 (-)
G266090 NA non-coding downstream 220375 47720906 ~ 47721133 (-)
G266359 NA non-coding upstream 130882 48074066 ~ 48075575 (-)
G266360 NA non-coding upstream 133396 48076580 ~ 48076886 (-)
G266362 NA non-coding upstream 134615 48077799 ~ 48079009 (-)
G266416 NA non-coding upstream 200338 48143522 ~ 48143729 (-)
G265988 NA other downstream 341693 47599218 ~ 47599815 (-)
G263274 NA other downstream 2403966 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 2837245 45099333 ~ 45104286 (-)
G262993 NA other downstream 2929259 45010172 ~ 45012249 (-)
G261580 NA other downstream 3910003 43989524 ~ 44031505 (-)
G268310 NA other upstream 1552293 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 1559232 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 other upstream 1620664 49563841 ~ 49608114 (-)
LOC110520119 NA other upstream 1924033 49867187 ~ 49871681 (-)

Expression


Co-expression Network