Gene
RNA
| Item | Value |
|---|---|
| gene id | G266425 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 48157514 ~ 48157785 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU302770 | True | 272 | lncRNA | 0.35 | 1 | 48157514 | 48157785 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118958240 | LOC106586190 | coding | downstream | 59825 | 48079101 ~ 48097689 (-) |
| LOC118958229 | NA | coding | downstream | 91011 | 48065493 ~ 48066503 (-) |
| LOC110504154 | ifih1 | coding | downstream | 97784 | 48045708 ~ 48059730 (-) |
| fap | LOC106586187 | coding | downstream | 111567 | 48033749 ~ 48045947 (-) |
| LOC110505248 | gcg | coding | downstream | 124080 | 48032036 ~ 48033434 (-) |
| LOC110520071 | LOC106586191 | coding | upstream | 76035 | 48233820 ~ 48269471 (-) |
| LOC110520072 | LOC106586192 | coding | upstream | 195624 | 48353409 ~ 48399492 (-) |
| LOC110520074 | LOC106586194 | coding | upstream | 242045 | 48399830 ~ 48448287 (-) |
| slc38a11 | slc38a11 | coding | upstream | 290613 | 48448398 ~ 48453258 (-) |
| LOC110520077 | LOC106586199 | coding | upstream | 420251 | 48578036 ~ 48610361 (-) |
| G266416 | NA | non-coding | downstream | 13785 | 48143522 ~ 48143729 (-) |
| G266362 | NA | non-coding | downstream | 78505 | 48077799 ~ 48079009 (-) |
| G266360 | NA | non-coding | downstream | 80628 | 48076580 ~ 48076886 (-) |
| G266359 | NA | non-coding | downstream | 81939 | 48074066 ~ 48075575 (-) |
| G266428 | NA | non-coding | upstream | 3994 | 48161779 ~ 48161997 (-) |
| LOC110520070 | LOC106586190 | non-coding | upstream | 11215 | 48114234 ~ 48170057 (-) |
| G266518 | NA | non-coding | upstream | 71737 | 48229522 ~ 48229761 (-) |
| G266520 | NA | non-coding | upstream | 73638 | 48231423 ~ 48231633 (-) |
| G266547 | NA | non-coding | upstream | 75379 | 48233164 ~ 48233372 (-) |
| G265988 | NA | other | downstream | 557699 | 47599218 ~ 47599815 (-) |
| G263274 | NA | other | downstream | 2619972 | 45536332 ~ 45537542 (-) |
| LOC110520012 | cssa21h2orf88 | other | downstream | 3053251 | 45099333 ~ 45104286 (-) |
| G262993 | NA | other | downstream | 3145265 | 45010172 ~ 45012249 (-) |
| G268310 | NA | other | upstream | 1337692 | 49495477 ~ 49495803 (-) |
| LOC118944672 | NA | other | upstream | 1344631 | 49494001 ~ 49503025 (-) |
| LOC110520112 | LOC106586230 | other | upstream | 1406063 | 49563841 ~ 49608114 (-) |
| LOC110520119 | NA | other | upstream | 1709432 | 49867187 ~ 49871681 (-) |
| LOC110520121 | LOC106581751 | other | upstream | 1742388 | 49895327 ~ 49901575 (-) |
