Gene
RNA
| Item | Value |
|---|---|
| gene id | G266613 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 48295552 ~ 48295855 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tc1 transposase |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU302967 | True | 304 | lncRNA | 0.44 | 1 | 48295552 | 48295855 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520071 | LOC106586191 | coding | downstream | 26081 | 48233820 ~ 48269471 (-) |
| LOC110520070 | LOC106586190 | coding | downstream | 125495 | 48114234 ~ 48170057 (-) |
| LOC118958240 | LOC106586190 | coding | downstream | 197863 | 48079101 ~ 48097689 (-) |
| LOC118958229 | NA | coding | downstream | 229049 | 48065493 ~ 48066503 (-) |
| LOC110504154 | ifih1 | coding | downstream | 235822 | 48045708 ~ 48059730 (-) |
| LOC110520072 | LOC106586192 | coding | upstream | 57554 | 48353409 ~ 48399492 (-) |
| LOC110520074 | LOC106586194 | coding | upstream | 103975 | 48399830 ~ 48448287 (-) |
| slc38a11 | slc38a11 | coding | upstream | 152543 | 48448398 ~ 48453258 (-) |
| LOC110520077 | LOC106586199 | coding | upstream | 282181 | 48578036 ~ 48610361 (-) |
| LOC110520082 | LOC106586202 | coding | upstream | 502584 | 48798439 ~ 48824632 (-) |
| G266605 | NA | non-coding | downstream | 2828 | 48292487 ~ 48292724 (-) |
| G266604 | NA | non-coding | downstream | 3186 | 48291845 ~ 48292366 (-) |
| G266599 | NA | non-coding | downstream | 6575 | 48288645 ~ 48288977 (-) |
| G266594 | NA | non-coding | downstream | 9185 | 48286149 ~ 48286367 (-) |
| G266588 | NA | non-coding | downstream | 13043 | 48282186 ~ 48282509 (-) |
| G266614 | NA | non-coding | upstream | 1 | 48295856 ~ 48296071 (-) |
| G266644 | NA | non-coding | upstream | 21529 | 48317384 ~ 48317636 (-) |
| G267706 | LOC106586196 | non-coding | upstream | 208602 | 48504457 ~ 48505213 (-) |
| G267705 | NA | non-coding | upstream | 209488 | 48505343 ~ 48508800 (-) |
| G267742 | LOC106581475 | non-coding | upstream | 263764 | 48559619 ~ 48559960 (-) |
| LOC110505248 | gcg | other | downstream | 262250 | 48032036 ~ 48033434 (-) |
| G265988 | NA | other | downstream | 695737 | 47599218 ~ 47599815 (-) |
| G263274 | NA | other | downstream | 2758010 | 45536332 ~ 45537542 (-) |
| LOC110520012 | cssa21h2orf88 | other | downstream | 3191289 | 45099333 ~ 45104286 (-) |
| G262993 | NA | other | downstream | 3283303 | 45010172 ~ 45012249 (-) |
| G268310 | NA | other | upstream | 1199622 | 49495477 ~ 49495803 (-) |
| LOC118944672 | NA | other | upstream | 1206561 | 49494001 ~ 49503025 (-) |
| LOC110520112 | LOC106586230 | other | upstream | 1267993 | 49563841 ~ 49608114 (-) |
| LOC110520119 | NA | other | upstream | 1571362 | 49867187 ~ 49871681 (-) |
| LOC110520121 | LOC106581751 | other | upstream | 1604318 | 49895327 ~ 49901575 (-) |
