G267706 (LOC106586196)


Basic Information

Item Value
gene id G267706
gene name LOC106586196
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 48504457 ~ 48505213 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU304179
TAACAACGATAAAGTCAAATACATTCCAACCAATGGTAAAGTAGTATTGTCGGAGTGAGATCATCTTCAGAATACACTCTCCGGTGAACATGACAATAAACACCAGGTTGATCTTGTAGAGAATTTTACGAATGTCATCTGCCTGGTCATCCGTCTCCACCATCATGGTGACCATATTAAGGCATATAAGAATCATGATGACAATGTCGAAGGCTTGCTTTGTAATGAAATCAAAAACAAATCCTTGAAACTTGCACTGGCCTAGGGATAGGCTTTTGGGGTTTCTTTGAGCCGAGCTTCTTCATAGCATTGTAGTATTTCTTCTGTTCCTCTGTCATGAAGATGTCTTGACCTCCAAAGTAAAGAGGCAAGACAAGCCTAGTTACATTCCTGCAGCTCTTACACACATTTAGTTGCCCATTGTTGGAGGGAAGAATCCTCATTACGTTAAATCAGAGAAAATGGATGCATGTATCATTGCATacaactttaaaaaaaagactTATCTTTTTCTTTTGCTGATTGAAGTTGTCTATAATGACACCAATGAAGAGGTTGAGTGTGAAGAAGGATCCAAATATGATGAATACCACAAAGTACAGATACATGTACAGATTCACTTCGTAGTCGGGTTGATCATCCAA

Function

NR:

description
hypothetical protein cypCar_00015241, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU304179 True 644 lncRNA 0.39 2 48504457 48505213

Neighbor

gene id symbol gene type direction distance location
slc38a11 slc38a11 coding downstream 51199 48448398 ~ 48453258 (-)
LOC110520074 LOC106586194 coding downstream 56170 48399830 ~ 48448287 (-)
LOC110520072 LOC106586192 coding downstream 104965 48353409 ~ 48399492 (-)
LOC110520071 LOC106586191 coding downstream 234986 48233820 ~ 48269471 (-)
LOC110520070 LOC106586190 coding downstream 334400 48114234 ~ 48170057 (-)
LOC110520077 LOC106586199 coding upstream 72823 48578036 ~ 48610361 (-)
LOC110520082 LOC106586202 coding upstream 293226 48798439 ~ 48824632 (-)
LOC118958775 NA coding upstream 354118 48859331 ~ 48873896 (-)
LOC118936376 NA coding upstream 374636 48879849 ~ 48881507 (-)
LOC110504168 LOC106581787 coding upstream 376851 48882064 ~ 48887719 (-)
G266644 NA non-coding downstream 186821 48317384 ~ 48317636 (-)
G266614 NA non-coding downstream 208386 48295856 ~ 48296071 (-)
G266613 NA non-coding downstream 208602 48295552 ~ 48295855 (-)
G266605 NA non-coding downstream 211733 48292487 ~ 48292724 (-)
G266604 NA non-coding downstream 212091 48291845 ~ 48292366 (-)
G267705 NA non-coding upstream 130 48505343 ~ 48508800 (-)
G267742 LOC106581475 non-coding upstream 54406 48559619 ~ 48559960 (-)
G267743 NA non-coding upstream 54870 48560083 ~ 48560535 (-)
G267785 NA non-coding upstream 115626 48620839 ~ 48621096 (-)
G267885 NA non-coding upstream 269335 48774548 ~ 48774880 (-)
LOC110505248 gcg other downstream 471155 48032036 ~ 48033434 (-)
G265988 NA other downstream 904642 47599218 ~ 47599815 (-)
G263274 NA other downstream 2966915 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 3400194 45099333 ~ 45104286 (-)
G262993 NA other downstream 3492208 45010172 ~ 45012249 (-)
G268310 NA other upstream 990264 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 997203 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 other upstream 1058635 49563841 ~ 49608114 (-)
LOC110520119 NA other upstream 1362004 49867187 ~ 49871681 (-)
LOC110520121 LOC106581751 other upstream 1394960 49895327 ~ 49901575 (-)

Expression


Co-expression Network