G268042


Basic Information

Item Value
gene id G268042
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49046774 ~ 49048127 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU304556
TGTTGGAGGAGCTCAAGTACATGTCAGGGGAATGGTTTGAGGAGATTCTGCTGGAGGAGACCATGGTTACGCTCCGGAGGCTGGAGAACCAGATATCTGGGCCAATGTGCCCGAGATGGCCCTTTTTCTGACCATGACTAGTCACCTCTCTACTCCATTAATGGACCGCGTAGCTAGCATGACCATGGAGCACATCAACAAGTACTCAGCAACTTCATGCCACCGTGCTGCCCTTTGCTGTACTGAATTATAATCCAGCAAGGGTGGATGAGCTGTTTGACATCTGCATTCAGCACTTCATACCTCACATCAGTCTCTTTGACCTCAATCTGCTGGTACTTGATCCCATCTGCTGCCTGTGGCTGATTTCTTCCCGGAGGACCTGATTCGAGAAATCGTCAACGTGGATTTCCTTGCCAAGCTGGATTCCCAGTTAGAAAGTTTGTTATATAATTATATTAGAAATATCCCAATGAAGACAAAGCCAGCATCCTGTATCCCCTACTATCTGAAAACATTCTTTTCAGATAAAGCTAAAGGGATAAGAGAACCTCTCTGTTATGTGGTAGCCCTGCCTGACGTGCAGGCGGATCCGCCTGTGTCTCACGGAGCTGAATCGGTCTGTGTGGTTGGAGTGTCCAGAGCGGATTGGTGTTAAACTCAAAAGGTAATCAAATGTGTCACCTGTTCTAGTTGTGAGCTGTATTTCTTCTGATCTCCCTAGACTTTGAATGTGTTCTGGACAGACACCACCAGGCAGTGGCCTACAGTGAGCAGAGCCAGCtgcagattttttttctccctttttcaCTTACTCAGTGTTACTGTGGACGTCTTGGATTCCAAATCATTCTACAAACCGTCTCGTCACATGAAAGGGGAAATCATGATGAGAAAGACATCTGGAGATTCTGGGACACCATGTTGTCCAGATCCCTCATTTTGAATGGAACTATATGGAGCTCTCCACACTGGATGCATGGAAGGAATACCTTAGGAAGAAGATAGTTACTGAGCTTTCCTGAAGCACCTAGATGTTGGATCAATGacatgaataattttgcacgccc
>TU304557
TGTTGGAGGAGCTCAAGTACATGTCAGGGGAATGGTTTGAGGAGATTCTGCTGGAGGAGACCATGGTTACGCTCCGGAGGCTGGAGAACCAGATATCTGGGCCAATGTGCCCGAGATGGCCCTTTTTCTGACCATGACTAGTCACCTCTCTACTCCATTAATGGACCGCGTAGCTAGCATGACCATGGAGCACATCAACAAGTACTCAGCAACTTCATGCCACCGTGCTGCCCTTTGCTGTACTGAATTATAATCCAGCAAGGGTGGATGAGCTGTTTGACATCTGCATTCAGCACTTCATACCTCACATCAGTCTCTTTGACCTCAATCTGCTGGTACTTGATCCCATCTGCTGCCTGTGGCTGATTTCTTCCCGGAGGACCTGATTCGAGAAATCGTCAACGTGGATTTCCTTGCCAAGCTGGATTCCCAGTTAACTTTGAATGTGTTCTGGACAGACACCACCAGGCAGTGGCCTACAGTGAGCAGAGCCAGCtgcagattttttttctccctttttcaCTTACTCAGTGTTACTGTGGACGTCTTGGATTCCAAATCATTCTACAAACCGTCTCGTCACATGAAAGGGGAAATCATGATGAGAAAGACATCTGGAGATTCTGGGACACCATGTTGTCCAGATCCCTCATTTTGAATGGAACTATATGGAGCTCTCCACACTGGATGCATGGAAGGAATACCTTAGGAAGAAGATAGTTACTGAGCTTTCCTGAAGCACCTAGATGTTGGATCAATGacatgaataattttgcacgccc

Function

NR:

description
FAST kinase domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU304556 False 1070 lncRNA 0.46 4 49046774 49048127
TU304557 True 782 lncRNA 0.47 5 49046774 49048127

Neighbor

gene id symbol gene type direction distance location
LOC110504179 LOC106586206 coding downstream 80332 48906411 ~ 48966442 (-)
LOC110504168 LOC106581787 coding downstream 159055 48882064 ~ 48887719 (-)
LOC118936376 NA coding downstream 165267 48879849 ~ 48881507 (-)
LOC118958775 NA coding downstream 172878 48859331 ~ 48873896 (-)
LOC110520082 LOC106586202 coding downstream 222142 48798439 ~ 48824632 (-)
ccdc173 ccdc173 coding upstream 8916 49055465 ~ 49075170 (-)
LOC110520100 LOC106586220 coding upstream 254906 49303033 ~ 49357448 (-)
LOC110520101 LOC106586223 coding upstream 342366 49390493 ~ 49413113 (-)
dlx2a dlx2 coding upstream 427851 49475978 ~ 49478117 (-)
LOC118944672 NA coding upstream 445874 49494001 ~ 49503025 (-)
G267991 NA non-coding downstream 59658 48986863 ~ 48987116 (-)
G267990 NA non-coding downstream 60167 48986357 ~ 48986607 (-)
G267939 NA non-coding downstream 188150 48856313 ~ 48858624 (-)
G267890 NA non-coding downstream 265274 48781285 ~ 48781500 (-)
G267888 NA non-coding downstream 266417 48777514 ~ 48780357 (-)
G268093 NA non-coding upstream 83820 49131947 ~ 49134168 (-)
G268122 NA non-coding upstream 130691 49178818 ~ 49179243 (-)
G268127 NA non-coding upstream 137547 49185674 ~ 49185920 (-)
G268137 NA non-coding upstream 147536 49195663 ~ 49195895 (-)
LOC110505248 gcg other downstream 1013472 48032036 ~ 48033434 (-)
G265988 NA other downstream 1446959 47599218 ~ 47599815 (-)
G263274 NA other downstream 3509232 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 3942511 45099333 ~ 45104286 (-)
G262993 NA other downstream 4034525 45010172 ~ 45012249 (-)
G268310 NA other upstream 447350 49495477 ~ 49495803 (-)
LOC110520112 LOC106586230 other upstream 515721 49563841 ~ 49608114 (-)
LOC110520119 NA other upstream 819090 49867187 ~ 49871681 (-)
LOC110520121 LOC106581751 other upstream 852046 49895327 ~ 49901575 (-)

Expression


Co-expression Network