G268160


Basic Information

Item Value
gene id G268160
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49358057 ~ 49359171 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU304679
AGGACAAGACCCCTAAGAATCTTCAAGTTGAGTTTTGACAAAGTGCCAGCATCAAAAATGCCTCTCGATCTCAGGTCTAGGTAGGTTGCAACATTTTTCCCTCTCAGCTGAGGCATCACTAGGAGGCGCTCAATGCACAGGGGCTGGAACACTCCACACAATAACACCAGTGTGTCCAAAACAAAGCAAGCGCAGTTCAACTGTTATCCACGTCGGTATTCGATACTTCCAACCATGTCAATGATTAATTTACAACCAAATACTACGTATACACAAACCTCGTCCTTTAGAACACGATAATTAAATAGTCATAACTATCACGACTGCTAAAACGACGTGTCCTTAGCATCAGATACACAGTGATCGCAGATAGAACGAGCCatatatttcaccggatgtataaatgtgaagcatccggttagCGTTTCcgctcactaccaaatatggggatgagagaAAGACCAGCAGTCGGCAGTGGGAGACGATAGAGCGAGGTGGATTTTGACCGGAATTCTTCAGATTATCTCaacgatgaaacatttgatctccatacagttttcagtttccaaaactagaatctgtaacaaacagagtggacaGCGTTTTGTAGACGTTACCTTTCGCCAAAGTATTTTTAAAAACAAAATCGTTTAGGAGGTCAAGGGCGAATTGAATTACTAAACTTCACATAGTAGGTGTTCCGCCCCACCCTCCTTCTTCTTTGGTGTAAGAGCTTTTGCGACAATTACGTGTGCattccgccacctactgtacaagTGGAAAATAAAGATCCGAAAGGGAAAAAATGCGGGGTCCctacacaggcccagaaggatcctgtGATGGCTGGACATTTCCTGGCGACAATAGTCCTTGCAGTGCTTCTGTGGTTAAGTCTTGGAGGCCCAAAAACTTCTCAGCTGCAGATATAATGATGTCTGCTTTCTTGGACTTCTTGGATGGTACAAAATCCACCTTCTTCACAATAAGTGTATCCAGACCACTTGATTGAGAT

Function

NR:

description
DDB1- and CUL4-associated factor 17

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU304679 True 1015 lncRNA 0.43 2 49358057 49359171

Neighbor

gene id symbol gene type direction distance location
LOC110520100 LOC106586220 coding downstream 609 49303033 ~ 49357448 (-)
ccdc173 ccdc173 coding downstream 282887 49055465 ~ 49075170 (-)
LOC110520089 NA coding downstream 306989 49047704 ~ 49051068 (-)
LOC118958916 NA coding downstream 310444 49046323 ~ 49047613 (-)
LOC110504179 LOC106586206 coding downstream 391615 48906411 ~ 48966442 (-)
LOC110520101 LOC106586223 coding upstream 31322 49390493 ~ 49413113 (-)
dlx2a dlx2 coding upstream 116807 49475978 ~ 49478117 (-)
LOC118944672 NA coding upstream 134830 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 coding upstream 204670 49563841 ~ 49608114 (-)
sp3a LOC106586237 coding upstream 435486 49794657 ~ 49802027 (-)
G268208 NA non-coding downstream 65204 49292629 ~ 49292853 (-)
G268207 NA non-coding downstream 66519 49291044 ~ 49291538 (-)
G268205 NA non-coding downstream 68565 49289270 ~ 49289492 (-)
G268204 NA non-coding downstream 71868 49285812 ~ 49286189 (-)
G268166 NA non-coding downstream 74625 49282309 ~ 49283432 (-)
G268284 NA non-coding upstream 98294 49457465 ~ 49457956 (-)
G268286 NA non-coding upstream 100428 49459599 ~ 49459807 (-)
G268293 NA non-coding upstream 106717 49465888 ~ 49466196 (-)
G268299 NA non-coding upstream 116164 49475335 ~ 49475699 (-)
G268312 NA non-coding upstream 138709 49497880 ~ 49498326 (-)
LOC110505248 gcg other downstream 1324755 48032036 ~ 48033434 (-)
G265988 NA other downstream 1758242 47599218 ~ 47599815 (-)
G263274 NA other downstream 3820515 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 4253794 45099333 ~ 45104286 (-)
G262993 NA other downstream 4345808 45010172 ~ 45012249 (-)
G268310 NA other upstream 136306 49495477 ~ 49495803 (-)
LOC110520119 NA other upstream 508046 49867187 ~ 49871681 (-)
LOC110520121 LOC106581751 other upstream 541002 49895327 ~ 49901575 (-)

Expression


Co-expression Network