G267308


Basic Information

Item Value
gene id G267308
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49447525 ~ 49447786 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU303728
tcctagatctgaatgaatgaaatattcttattaaatacttttttctttacatagttgaatgcgctgacaacaaaatcacacaaaaatgatcaatggaaatcaaatttatcaacccatggaggtctggatttggagtcacactcaaaattaaagtggaaaaccacactacaggctgatccaatttgtaatgttcttaaaacaagtcaaaatgaggctcagtagtgtgtgttgcctccacgtgcctgtatgacctccctacaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303728 True 262 lncRNA 0.36 1 49447525 49447786

Neighbor

gene id symbol gene type direction distance location
hat1 hat1 coding upstream 17443 49413492 ~ 49430082 (+)
dync1i2a LOC106586225 coding upstream 56930 49368762 ~ 49390595 (+)
LOC110520104 LOC106586222 coding upstream 79184 49365942 ~ 49368341 (+)
dcaf17 dcaf17 coding upstream 82707 49357526 ~ 49364818 (+)
LOC110520099 gors2 coding upstream 146749 49296162 ~ 49300776 (+)
dlx1a dlx1 coding downstream 16865 49464651 ~ 49470746 (+)
itga6a LOC106586229 coding downstream 82192 49529978 ~ 49557537 (+)
pdk1 pdk1 coding downstream 112299 49560085 ~ 49563837 (+)
LOC110520113 LOC106586233 coding downstream 181460 49629246 ~ 49676777 (+)
zak LOC106586235 coding downstream 229143 49676929 ~ 49731937 (+)
G267259 NA non-coding upstream 61562 49333176 ~ 49385963 (+)
G267235 NA non-coding upstream 145970 49301268 ~ 49301555 (+)
G267099 NA non-coding upstream 162422 49283571 ~ 49285103 (+)
G267217 NA non-coding upstream 193311 49253953 ~ 49254214 (+)
G267214 NA non-coding upstream 196393 49250783 ~ 49251132 (+)
G267309 NA non-coding downstream 762 49448548 ~ 49448806 (+)
G267315 NA non-coding downstream 5942 49453728 ~ 49453950 (+)
G267324 NA non-coding downstream 18087 49465873 ~ 49466114 (+)
G267347 NA non-coding downstream 47811 49495597 ~ 49495810 (+)
G267349 NA non-coding downstream 50141 49497927 ~ 49498326 (+)
LOC110520046 LOC106586167 other upstream 2615281 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 3262721 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 3368100 46075484 ~ 46079425 (+)
G263710 NA other upstream 3513107 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 3608045 45838921 ~ 45839480 (+)
G267358 NA other downstream 63017 49510803 ~ 49512475 (+)
G267381 NA other downstream 106712 49554498 ~ 49555838 (+)
G267529 NA other downstream 388831 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 714515 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 1154516 50601983 ~ 50618761 (+)

Expression


Co-expression Network