Gene
RNA
| Item | Value |
|---|---|
| gene id | G268299 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 49475335 ~ 49475699 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU304841 | True | 365 | lncRNA | 0.47 | 1 | 49475335 | 49475699 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520101 | LOC106586223 | coding | downstream | 62222 | 49390493 ~ 49413113 (-) |
| LOC110520100 | LOC106586220 | coding | downstream | 117887 | 49303033 ~ 49357448 (-) |
| ccdc173 | ccdc173 | coding | downstream | 400165 | 49055465 ~ 49075170 (-) |
| LOC110520089 | NA | coding | downstream | 424267 | 49047704 ~ 49051068 (-) |
| LOC118958916 | NA | coding | downstream | 427722 | 49046323 ~ 49047613 (-) |
| dlx2a | dlx2 | coding | upstream | 279 | 49475978 ~ 49478117 (-) |
| LOC118944672 | NA | coding | upstream | 18302 | 49494001 ~ 49503025 (-) |
| LOC110520112 | LOC106586230 | coding | upstream | 88142 | 49563841 ~ 49608114 (-) |
| sp3a | LOC106586237 | coding | upstream | 318958 | 49794657 ~ 49802027 (-) |
| LOC110520118 | LOC106586238 | coding | upstream | 339072 | 49814771 ~ 49862076 (-) |
| G268293 | NA | non-coding | downstream | 9139 | 49465888 ~ 49466196 (-) |
| G268286 | NA | non-coding | downstream | 15528 | 49459599 ~ 49459807 (-) |
| G268284 | NA | non-coding | downstream | 17379 | 49457465 ~ 49457956 (-) |
| G268227 | NA | non-coding | downstream | 70131 | 49350822 ~ 49405204 (-) |
| G268160 | NA | non-coding | downstream | 116164 | 49358057 ~ 49359171 (-) |
| G268312 | NA | non-coding | upstream | 22181 | 49497880 ~ 49498326 (-) |
| G268313 | NA | non-coding | upstream | 24536 | 49500235 ~ 49500444 (-) |
| G268317 | NA | non-coding | upstream | 28328 | 49504027 ~ 49504226 (-) |
| G268320 | NA | non-coding | upstream | 35249 | 49510948 ~ 49511446 (-) |
| G268328 | NA | non-coding | upstream | 49723 | 49525422 ~ 49525705 (-) |
| LOC110505248 | gcg | other | downstream | 1442033 | 48032036 ~ 48033434 (-) |
| G265988 | NA | other | downstream | 1875520 | 47599218 ~ 47599815 (-) |
| G263274 | NA | other | downstream | 3937793 | 45536332 ~ 45537542 (-) |
| LOC110520012 | cssa21h2orf88 | other | downstream | 4371072 | 45099333 ~ 45104286 (-) |
| G262993 | NA | other | downstream | 4463086 | 45010172 ~ 45012249 (-) |
| G268310 | NA | other | upstream | 19778 | 49495477 ~ 49495803 (-) |
| LOC110520119 | NA | other | upstream | 391518 | 49867187 ~ 49871681 (-) |
| LOC110520121 | LOC106581751 | other | upstream | 424474 | 49895327 ~ 49901575 (-) |
