G267349


Basic Information

Item Value
gene id G267349
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49497927 ~ 49498326 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU303769
ccagccattcctttgtttccagcactcaagagaagggcagacgatggccgattgaattgaagtttgttttgcatgtctaaaacatcataaagcttgcttctgcacttagtttgacctgtttagtcgacatataatgtgtaattttgaagttttgatgcgcaacttatccggaccagaggaagttttgggtgcatttcagctgatgttattagcagtagctaatacaaagacgcaagacttgaaaccaaacgatgtattgggtaagtatgaagccttccagaacattctgaacgaagaccatcgaaggtaagggaatatttatgcttaaatctgtgtttctgttgactccaacattacgtggaaatgtagcttggaactgagcgctgtctcagcatatgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303769 True 400 lncRNA 0.41 1 49497927 49498326

Neighbor

gene id symbol gene type direction distance location
dlx1a dlx1 coding upstream 27181 49464651 ~ 49470746 (+)
hat1 hat1 coding upstream 67845 49413492 ~ 49430082 (+)
dync1i2a LOC106586225 coding upstream 107332 49368762 ~ 49390595 (+)
LOC110520104 LOC106586222 coding upstream 129586 49365942 ~ 49368341 (+)
dcaf17 dcaf17 coding upstream 133109 49357526 ~ 49364818 (+)
itga6a LOC106586229 coding downstream 31652 49529978 ~ 49557537 (+)
pdk1 pdk1 coding downstream 61759 49560085 ~ 49563837 (+)
LOC110520113 LOC106586233 coding downstream 130920 49629246 ~ 49676777 (+)
zak LOC106586235 coding downstream 178603 49676929 ~ 49731937 (+)
cdca7a LOC106586236 coding downstream 233550 49731876 ~ 49735462 (+)
G267347 NA non-coding upstream 2117 49495597 ~ 49495810 (+)
G267324 NA non-coding upstream 31813 49465873 ~ 49466114 (+)
G267315 NA non-coding upstream 43977 49453728 ~ 49453950 (+)
G267309 NA non-coding upstream 49121 49448548 ~ 49448806 (+)
G267308 NA non-coding upstream 50141 49447525 ~ 49447786 (+)
G267351 NA non-coding downstream 2482 49500808 ~ 49501694 (+)
G267352 NA non-coding downstream 4170 49502496 ~ 49502698 (+)
G267353 NA non-coding downstream 4391 49502717 ~ 49503137 (+)
G267365 NA non-coding downstream 28717 49527043 ~ 49527306 (+)
G267372 NA non-coding downstream 37987 49536313 ~ 49536514 (+)
LOC110520046 LOC106586167 other upstream 2665683 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 3313123 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 3418502 46075484 ~ 46079425 (+)
G263710 NA other upstream 3563509 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 3658447 45838921 ~ 45839480 (+)
G267358 NA other downstream 12477 49510803 ~ 49512475 (+)
G267381 NA other downstream 56172 49554498 ~ 49555838 (+)
G267529 NA other downstream 338291 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 663975 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 1103976 50601983 ~ 50618761 (+)

Expression


Co-expression Network