G267358


Basic Information

Item Value
gene id G267358
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49510803 ~ 49512475 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU303780
ATGCGATCATGTGACCATTTATTAGAGCTACACCAAAGAATCAAACTTAAAATGGATGTCATCAATTAGAATGCATTTAAATCCCTTTGAACCACACTACACTCCCATTTCCTCATATTGAGACTTGAAGACACAGAATGACAAGAGGCTAAGTGTGTAATAAATGAGGTGAACAGATGGCGTGGTAATGAATGAGGAGTGCTGTACTCCTTAGTGGTCTAATGGTGCATCTGTCATTGCATTGCATTGCAGTGACTAGTCCAAGATTGTTAGATGGGGTGTAACGGCAGTTGTCTAAATGCCTTTATGAGTGCCAAGCCTGCTGTGCTCTTTGGGCTCTGTCCGATAACTTCTGGGTTTGGTTTCTTCAACCAGTCAGTTTTGATTTCACCACTGTAACTTCAGAAGCCAGCCCTCCAATCTCAAAAGCAGCATGGGTTCCAAACAGCACTGGTATTAAGATGCCTTAACAAAGCAATAAAGTCTGGTGGCAAAACATATTTAAAGTGGtaaaatatgtatatacataATAAATGATGTTTAATGGAATATAAAGTATATAAAAAtgtacaggaccagtcaaaagtttggacacacctactcacaccTAGGACACAcctattcaagggtttttccttatttttcctattttatacattgtagaaaaattgtgaagacatcaaaaccatgaaataacacatggaatcatgtactgtagtaatcaaaaaagtgttaaacaaatcaaaacatattttatatttgagattcttcaaagtagccatcctttgccttgatgacaggtttgcacactcttggcattctctcaaacagcttcacctggaatgcttttccaacagtcttgaaggagttcccacatatgctgagcccttgttgggtgtttttccttcactctgtagtccaactcatccctaaccatctcatttgggttgaggtcgggggattgtggaggccaggtcatctgatgcagcaatccatcagtctccttcttggtcaaatagcccttacacagcctggaggtgtgttgggtcattgtcctgttgaaaaacaaatgaaaaccagatggaatggtgtgtcgctgcagaatgctgtggtagccatgctggttaagtgtgccttgaattctaagtaaatcacagacagtgtcatcagcaaagcaccctcacaccctAACATCTccgtgcttcatggtgggaaccgcacatgcagagatcatccgttcacctactctgtctcacaaagTCATGGCGGTTggtaccaaaaatctcaaatttggagtcatcagaccaaaggacagatttccaccggtctaatggccattgctcgtgtttcttggcccaagcaagtctcttcttcttattggtgtcctttagtagtggtttcttcgcagcaattcgaccatgaaggcctgattcacacagtctcctctgaacaattgatgttgagatgtgtctgttacttgaactctgtgaagcatttatttgggctgcaatttttgagtctggtaactctaatgaactctgtgtctttctttcctgtggcggtcctcatgagagccagtttcatcatagtggttgatggcttttgcgactgcacttaaagaaactttcaaagttcttgaacttTTCCGTATTAACTGACTTTCATGTCTCAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303780 True 1673 TUCP 0.41 1 49510803 49512475

Neighbor

gene id symbol gene type direction distance location
dlx1a dlx1 coding upstream 40057 49464651 ~ 49470746 (+)
hat1 hat1 coding upstream 80721 49413492 ~ 49430082 (+)
dync1i2a LOC106586225 coding upstream 120208 49368762 ~ 49390595 (+)
LOC110520104 LOC106586222 coding upstream 142462 49365942 ~ 49368341 (+)
dcaf17 dcaf17 coding upstream 145985 49357526 ~ 49364818 (+)
itga6a LOC106586229 coding downstream 17503 49529978 ~ 49557537 (+)
pdk1 pdk1 coding downstream 47610 49560085 ~ 49563837 (+)
LOC110520113 LOC106586233 coding downstream 116771 49629246 ~ 49676777 (+)
zak LOC106586235 coding downstream 164454 49676929 ~ 49731937 (+)
cdca7a LOC106586236 coding downstream 219401 49731876 ~ 49735462 (+)
G267353 NA non-coding upstream 7666 49502717 ~ 49503137 (+)
G267352 NA non-coding upstream 8105 49502496 ~ 49502698 (+)
G267351 NA non-coding upstream 9109 49500808 ~ 49501694 (+)
G267349 NA non-coding upstream 12477 49497927 ~ 49498326 (+)
G267347 NA non-coding upstream 14993 49495597 ~ 49495810 (+)
G267365 NA non-coding downstream 14568 49527043 ~ 49527306 (+)
G267372 NA non-coding downstream 23838 49536313 ~ 49536514 (+)
G267374 NA non-coding downstream 25018 49537493 ~ 49537947 (+)
G267375 NA non-coding downstream 26415 49538890 ~ 49539279 (+)
G267377 NA non-coding downstream 27373 49539848 ~ 49540334 (+)
LOC110520046 LOC106586167 other upstream 2678559 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 3325999 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 3431378 46075484 ~ 46079425 (+)
G263710 NA other upstream 3576385 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 3671323 45838921 ~ 45839480 (+)
G267381 NA other downstream 42023 49554498 ~ 49555838 (+)
G267529 NA other downstream 324142 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 649826 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 1089827 50601983 ~ 50618761 (+)
G269291 rap2a other downstream 1386114 50898589 ~ 50900277 (+)

Expression


Co-expression Network