G267374


Basic Information

Item Value
gene id G267374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49537493 ~ 49537947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU303796
aaatgaccagaaacaaagaactttcttctgaaactcgtcagtctattcttgttctgagaaatgaatgctattccatgcgagaaattgccaagaaactgaagatctcttcCACTGGccagtcctcaactggcaacttcattaaatagtccccgcaaaacaccagtcttaacgtcaacagtgaagaagcaactccaggatgctggccttctaggcagagttcctctgtccagtgtctgtgttcttttgcccatcttaatattttatttttattggccagtctgagatatggctttttctttgcaactctgcctagaaggccagcatcccggagtcacgtCTTCACTGTTGATTTTGAGACTAGAGGTCGAACGAGTATGATTTATCAATGCcaataccaataccgattattggaggaccaaaaaaagccgatatcgATTAATCAgacagtttatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303796 True 455 lncRNA 0.41 1 49537493 49537947

Neighbor

gene id symbol gene type direction distance location
dlx1a dlx1 coding upstream 66747 49464651 ~ 49470746 (+)
hat1 hat1 coding upstream 107411 49413492 ~ 49430082 (+)
dync1i2a LOC106586225 coding upstream 146898 49368762 ~ 49390595 (+)
LOC110520104 LOC106586222 coding upstream 169152 49365942 ~ 49368341 (+)
dcaf17 dcaf17 coding upstream 172675 49357526 ~ 49364818 (+)
pdk1 pdk1 coding downstream 22138 49560085 ~ 49563837 (+)
LOC110520113 LOC106586233 coding downstream 91299 49629246 ~ 49676777 (+)
zak LOC106586235 coding downstream 138982 49676929 ~ 49731937 (+)
cdca7a LOC106586236 coding downstream 193929 49731876 ~ 49735462 (+)
LOC118959582 NA coding downstream 219870 49757817 ~ 49767356 (+)
G267372 NA non-coding upstream 979 49536313 ~ 49536514 (+)
G267365 NA non-coding upstream 10187 49527043 ~ 49527306 (+)
G267353 NA non-coding upstream 34356 49502717 ~ 49503137 (+)
G267352 NA non-coding upstream 34795 49502496 ~ 49502698 (+)
G267351 NA non-coding upstream 35799 49500808 ~ 49501694 (+)
G267375 NA non-coding downstream 943 49538890 ~ 49539279 (+)
G267377 NA non-coding downstream 1901 49539848 ~ 49540334 (+)
itga6a LOC106586229 non-coding downstream 13550 49529978 ~ 49557537 (+)
G267380 NA non-coding downstream 15999 49553946 ~ 49554345 (+)
G267385 NA non-coding downstream 25941 49563888 ~ 49565192 (+)
G267358 NA other upstream 25018 49510803 ~ 49512475 (+)
LOC110520046 LOC106586167 other upstream 2705249 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 3352689 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 3458068 46075484 ~ 46079425 (+)
G263710 NA other upstream 3603075 45934119 ~ 45934418 (+)
G267381 NA other downstream 16551 49554498 ~ 49555838 (+)
G267529 NA other downstream 298670 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 624354 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 1064355 50601983 ~ 50618761 (+)
G269291 rap2a other downstream 1360642 50898589 ~ 50900277 (+)

Expression


Co-expression Network