G267375


Basic Information

Item Value
gene id G267375
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49538890 ~ 49539279 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU303797
tctgtgtattgattttaagaaagacattagtgtttatggttaggtacatttgtgcaaagattgtgcttttttcgggaatgcgcttttgttaaatcatcacccttttggcgaagttgaagtaggctgtgattcgatgataaattaacaggcaccacattgattatatgcaactcaggacaagctagttaacctagtaatatcatcaaccatatgtagttaactagtgattatgcgaagattgattgttttttacaagataagttaaatgctagctagcaacttaccttggctccttgcagccacaaggtccttttgacgtTGCACTCGTgcaacaggtggtcagcctgccacgcagtttcctcgtggattgcaatgttatcggccataatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303797 True 390 lncRNA 0.39 1 49538890 49539279

Neighbor

gene id symbol gene type direction distance location
dlx1a dlx1 coding upstream 68144 49464651 ~ 49470746 (+)
hat1 hat1 coding upstream 108808 49413492 ~ 49430082 (+)
dync1i2a LOC106586225 coding upstream 148295 49368762 ~ 49390595 (+)
LOC110520104 LOC106586222 coding upstream 170549 49365942 ~ 49368341 (+)
dcaf17 dcaf17 coding upstream 174072 49357526 ~ 49364818 (+)
pdk1 pdk1 coding downstream 20806 49560085 ~ 49563837 (+)
LOC110520113 LOC106586233 coding downstream 89967 49629246 ~ 49676777 (+)
zak LOC106586235 coding downstream 137650 49676929 ~ 49731937 (+)
cdca7a LOC106586236 coding downstream 192597 49731876 ~ 49735462 (+)
LOC118959582 NA coding downstream 218538 49757817 ~ 49767356 (+)
G267374 NA non-coding upstream 943 49537493 ~ 49537947 (+)
G267372 NA non-coding upstream 2376 49536313 ~ 49536514 (+)
G267365 NA non-coding upstream 11584 49527043 ~ 49527306 (+)
G267353 NA non-coding upstream 35753 49502717 ~ 49503137 (+)
G267352 NA non-coding upstream 36192 49502496 ~ 49502698 (+)
G267377 NA non-coding downstream 569 49539848 ~ 49540334 (+)
itga6a LOC106586229 non-coding downstream 12218 49529978 ~ 49557537 (+)
G267380 NA non-coding downstream 14667 49553946 ~ 49554345 (+)
G267385 NA non-coding downstream 24609 49563888 ~ 49565192 (+)
G267416 NA non-coding downstream 71796 49611075 ~ 49611419 (+)
G267358 NA other upstream 26415 49510803 ~ 49512475 (+)
LOC110520046 LOC106586167 other upstream 2706646 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 3354086 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 3459465 46075484 ~ 46079425 (+)
G263710 NA other upstream 3604472 45934119 ~ 45934418 (+)
G267381 NA other downstream 15219 49554498 ~ 49555838 (+)
G267529 NA other downstream 297338 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 623022 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 1063023 50601983 ~ 50618761 (+)
G269291 rap2a other downstream 1359310 50898589 ~ 50900277 (+)

Expression


Co-expression Network