Gene
RNA
| Item | Value |
|---|---|
| gene id | G267380 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 49553946 ~ 49554345 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU303802 | True | 400 | lncRNA | 0.36 | 1 | 49553946 | 49554345 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dlx1a | dlx1 | coding | upstream | 83200 | 49464651 ~ 49470746 (+) |
| hat1 | hat1 | coding | upstream | 123864 | 49413492 ~ 49430082 (+) |
| dync1i2a | LOC106586225 | coding | upstream | 163351 | 49368762 ~ 49390595 (+) |
| LOC110520104 | LOC106586222 | coding | upstream | 185605 | 49365942 ~ 49368341 (+) |
| dcaf17 | dcaf17 | coding | upstream | 189128 | 49357526 ~ 49364818 (+) |
| pdk1 | pdk1 | coding | downstream | 5740 | 49560085 ~ 49563837 (+) |
| LOC110520113 | LOC106586233 | coding | downstream | 74901 | 49629246 ~ 49676777 (+) |
| zak | LOC106586235 | coding | downstream | 122584 | 49676929 ~ 49731937 (+) |
| cdca7a | LOC106586236 | coding | downstream | 177531 | 49731876 ~ 49735462 (+) |
| LOC118959582 | NA | coding | downstream | 203472 | 49757817 ~ 49767356 (+) |
| G267377 | NA | non-coding | upstream | 13612 | 49539848 ~ 49540334 (+) |
| G267375 | NA | non-coding | upstream | 14667 | 49538890 ~ 49539279 (+) |
| G267374 | NA | non-coding | upstream | 15999 | 49537493 ~ 49537947 (+) |
| G267372 | NA | non-coding | upstream | 17432 | 49536313 ~ 49536514 (+) |
| G267365 | NA | non-coding | upstream | 26640 | 49527043 ~ 49527306 (+) |
| G267385 | NA | non-coding | downstream | 9543 | 49563888 ~ 49565192 (+) |
| G267416 | NA | non-coding | downstream | 56730 | 49611075 ~ 49611419 (+) |
| G267427 | NA | non-coding | downstream | 60239 | 49614584 ~ 49614845 (+) |
| G267471 | NA | non-coding | downstream | 190128 | 49744473 ~ 49747702 (+) |
| G267503 | NA | non-coding | downstream | 237410 | 49791755 ~ 49794631 (+) |
| G267358 | NA | other | upstream | 41471 | 49510803 ~ 49512475 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 2721702 | 46801058 ~ 46832288 (+) |
| G263859 | LOC107588258 | other | upstream | 3369142 | 46184134 ~ 46184804 (+) |
| G263733 | LOC106586158 | other | upstream | 3474521 | 46075484 ~ 46079425 (+) |
| G263710 | NA | other | upstream | 3619528 | 45934119 ~ 45934418 (+) |
| G267381 | NA | other | downstream | 153 | 49554498 ~ 49555838 (+) |
| G267529 | NA | other | downstream | 282272 | 49836617 ~ 49855502 (+) |
| hoxd3a | hoxd3 | other | downstream | 607956 | 50162278 ~ 50184327 (+) |
| LOC110520146 | ino80d | other | downstream | 1047957 | 50601983 ~ 50618761 (+) |
| G269291 | rap2a | other | downstream | 1344244 | 50898589 ~ 50900277 (+) |
