G267416


Basic Information

Item Value
gene id G267416
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49611075 ~ 49611419 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU303838
gagtcttggtggttccaaacttcttccatttaagaatgatggaggccacagtgttcttcaatgctgcagaaatgttttggtacccttcccgagacttgtgcctcgacacaatcctgtctcgtgctctacggacaattccttcgacctcatggtttggtatCTGCTGTGAACGTTggaaccttacatagacaggtgtgtgcctttccaaatcatgtccaatcaattgaatttactacaggtggactccaatcaagttgtaaaaacatctcaagggtgatcaatggaaacaggatgcacctgagcttaatttcgtgtctcatagcaaaaggtctgaatacttatgta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303838 True 345 lncRNA 0.43 1 49611075 49611419

Neighbor

gene id symbol gene type direction distance location
pdk1 pdk1 coding upstream 47238 49560085 ~ 49563837 (+)
itga6a LOC106586229 coding upstream 53538 49529978 ~ 49557537 (+)
dlx1a dlx1 coding upstream 140329 49464651 ~ 49470746 (+)
hat1 hat1 coding upstream 180993 49413492 ~ 49430082 (+)
dync1i2a LOC106586225 coding upstream 220480 49368762 ~ 49390595 (+)
LOC110520113 LOC106586233 coding downstream 17827 49629246 ~ 49676777 (+)
zak LOC106586235 coding downstream 65510 49676929 ~ 49731937 (+)
cdca7a LOC106586236 coding downstream 120457 49731876 ~ 49735462 (+)
LOC118959582 NA coding downstream 146398 49757817 ~ 49767356 (+)
LOC110520117 LOC106586239 coding downstream 250820 49862239 ~ 49865998 (+)
G267385 NA non-coding upstream 45883 49563888 ~ 49565192 (+)
G267380 NA non-coding upstream 56730 49553946 ~ 49554345 (+)
G267377 NA non-coding upstream 70741 49539848 ~ 49540334 (+)
G267375 NA non-coding upstream 71796 49538890 ~ 49539279 (+)
G267427 NA non-coding downstream 3165 49614584 ~ 49614845 (+)
G267471 NA non-coding downstream 133054 49744473 ~ 49747702 (+)
G267503 NA non-coding downstream 180336 49791755 ~ 49794631 (+)
G267546 NA non-coding downstream 249957 49861376 ~ 49861654 (+)
G267547 NA non-coding downstream 255796 49867215 ~ 49867792 (+)
G267381 NA other upstream 55237 49554498 ~ 49555838 (+)
G267358 NA other upstream 98600 49510803 ~ 49512475 (+)
LOC110520046 LOC106586167 other upstream 2778831 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 3426271 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 3531650 46075484 ~ 46079425 (+)
G267529 NA other downstream 225198 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 550882 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 990883 50601983 ~ 50618761 (+)
G269291 rap2a other downstream 1287170 50898589 ~ 50900277 (+)
LOC110520169 il1rl1 other downstream 1962561 51573980 ~ 51582567 (+)

Expression


Co-expression Network