G267427


Basic Information

Item Value
gene id G267427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49614584 ~ 49614845 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU303852
gtgtatgtaaacttccaacttcaactgtatgtgtgcagtggtgtaggctgattggtggtggtgctcatgcttcctatcactcagaagttatgtGGCAAGGTAAGGTGACAACAATTGCCCACCATGGATTTTTCCcagttcaatcaatcaaatttataaAACTCTTCTTACATTAgctgatatcacaaagtgctgtacagaaaacccagcctaaaaccccaaacagcaagcaatgcagatgtagaagcacggtggctaggaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303852 True 262 lncRNA 0.42 1 49614584 49614845

Neighbor

gene id symbol gene type direction distance location
pdk1 pdk1 coding upstream 50747 49560085 ~ 49563837 (+)
itga6a LOC106586229 coding upstream 57047 49529978 ~ 49557537 (+)
dlx1a dlx1 coding upstream 143838 49464651 ~ 49470746 (+)
hat1 hat1 coding upstream 184502 49413492 ~ 49430082 (+)
dync1i2a LOC106586225 coding upstream 223989 49368762 ~ 49390595 (+)
LOC110520113 LOC106586233 coding downstream 14401 49629246 ~ 49676777 (+)
zak LOC106586235 coding downstream 62084 49676929 ~ 49731937 (+)
cdca7a LOC106586236 coding downstream 117031 49731876 ~ 49735462 (+)
LOC118959582 NA coding downstream 142972 49757817 ~ 49767356 (+)
LOC110520117 LOC106586239 coding downstream 247394 49862239 ~ 49865998 (+)
G267416 NA non-coding upstream 3165 49611075 ~ 49611419 (+)
G267385 NA non-coding upstream 49392 49563888 ~ 49565192 (+)
G267380 NA non-coding upstream 60239 49553946 ~ 49554345 (+)
G267377 NA non-coding upstream 74250 49539848 ~ 49540334 (+)
G267471 NA non-coding downstream 129628 49744473 ~ 49747702 (+)
G267503 NA non-coding downstream 176910 49791755 ~ 49794631 (+)
G267546 NA non-coding downstream 246531 49861376 ~ 49861654 (+)
G267547 NA non-coding downstream 252370 49867215 ~ 49867792 (+)
G267579 NA non-coding downstream 291617 49906462 ~ 49951847 (+)
G267381 NA other upstream 58746 49554498 ~ 49555838 (+)
G267358 NA other upstream 102109 49510803 ~ 49512475 (+)
LOC110520046 LOC106586167 other upstream 2782340 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 3429780 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 3535159 46075484 ~ 46079425 (+)
G267529 NA other downstream 221772 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 547456 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 987457 50601983 ~ 50618761 (+)
G269291 rap2a other downstream 1283744 50898589 ~ 50900277 (+)
LOC110520169 il1rl1 other downstream 1959135 51573980 ~ 51582567 (+)

Expression


Co-expression Network