Gene
RNA
| Item | Value |
|---|---|
| gene id | G267579 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 49906462 ~ 49951847 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU304034 | True | 846 | lncRNA | 0.42 | 2 | 49906462 | 49951847 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504188 | scrn3 | coding | upstream | 32245 | 49871807 ~ 49874217 (+) |
| LOC110520117 | LOC106586239 | coding | upstream | 40464 | 49862239 ~ 49865998 (+) |
| LOC118959582 | NA | coding | upstream | 139106 | 49757817 ~ 49767356 (+) |
| cdca7a | LOC106586236 | coding | upstream | 171000 | 49731876 ~ 49735462 (+) |
| zak | LOC106586235 | coding | upstream | 174525 | 49676929 ~ 49731937 (+) |
| LOC118944674 | NA | coding | downstream | 92871 | 50044718 ~ 50063834 (+) |
| hoxd13a | hoxd13aa | coding | downstream | 182848 | 50134695 ~ 50136597 (+) |
| hoxd12a | hoxd12 | coding | downstream | 187366 | 50139213 ~ 50141004 (+) |
| hoxd11a | hoxd11aa | coding | downstream | 192808 | 50144655 ~ 50146492 (+) |
| hoxd10a | hoxd10 | coding | downstream | 194964 | 50146811 ~ 50153227 (+) |
| G267547 | NA | non-coding | upstream | 38670 | 49867215 ~ 49867792 (+) |
| G267546 | NA | non-coding | upstream | 44808 | 49861376 ~ 49861654 (+) |
| G267503 | NA | non-coding | upstream | 111831 | 49791755 ~ 49794631 (+) |
| G267471 | NA | non-coding | upstream | 158760 | 49744473 ~ 49747702 (+) |
| G267427 | NA | non-coding | upstream | 291617 | 49614584 ~ 49614845 (+) |
| G267594 | NA | non-coding | downstream | 3669 | 49955516 ~ 49955866 (+) |
| G267596 | NA | non-coding | downstream | 5226 | 49957073 ~ 49957381 (+) |
| G267608 | atf2 | non-coding | downstream | 23879 | 49975726 ~ 49976765 (+) |
| G267551 | atp5g2 | non-coding | downstream | 27369 | 49979216 ~ 49981768 (+) |
| G267615 | NA | non-coding | downstream | 34104 | 49985951 ~ 49986164 (+) |
| G267529 | NA | other | upstream | 50960 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 350624 | 49554498 ~ 49555838 (+) |
| G267358 | NA | other | upstream | 393987 | 49510803 ~ 49512475 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 3074218 | 46801058 ~ 46832288 (+) |
| G263859 | LOC107588258 | other | upstream | 3721658 | 46184134 ~ 46184804 (+) |
| hoxd3a | hoxd3 | other | downstream | 210454 | 50162278 ~ 50184327 (+) |
| LOC110520146 | ino80d | other | downstream | 650455 | 50601983 ~ 50618761 (+) |
| G269291 | rap2a | other | downstream | 946742 | 50898589 ~ 50900277 (+) |
| LOC110520169 | il1rl1 | other | downstream | 1622133 | 51573980 ~ 51582567 (+) |
| acvr2aa | LOC106586327 | other | downstream | 3215105 | 53124656 ~ 53172428 (+) |
