Gene
RNA
| Item | Value |
|---|---|
| gene id | G268548 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 49940876 ~ 49945765 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU305123 | False | 250 | lncRNA | 0.46 | 2 | 49940876 | 49945765 |
| TU305125 | True | 339 | lncRNA | 0.46 | 2 | 49940876 | 49945765 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520122 | LOC106586243 | coding | downstream | 20548 | 49905433 ~ 49920328 (-) |
| LOC110520121 | LOC106581751 | coding | downstream | 39301 | 49895327 ~ 49901575 (-) |
| LOC110520120 | LOC106586242 | coding | downstream | 45766 | 49879110 ~ 49895110 (-) |
| LOC110520119 | NA | coding | downstream | 69195 | 49867187 ~ 49871681 (-) |
| LOC110520118 | LOC106586238 | coding | downstream | 78800 | 49814771 ~ 49862076 (-) |
| atf2 | atf2 | coding | upstream | 16702 | 49962467 ~ 49978892 (-) |
| LOC110520125 | atp5g3 | coding | upstream | 33431 | 49979196 ~ 49981870 (-) |
| lnpa | LOC100194569 | coding | upstream | 138335 | 50084100 ~ 50099697 (-) |
| evx2 | evx2a | coding | upstream | 173904 | 50119669 ~ 50124620 (-) |
| nfe2l2a | LOC106586247 | coding | upstream | 379344 | 50325109 ~ 50332906 (-) |
| G268470 | NA | non-coding | downstream | 10214 | 49922997 ~ 49930662 (-) |
| G268502 | NA | non-coding | downstream | 134206 | 49806408 ~ 49806670 (-) |
| G268501 | NA | non-coding | downstream | 135697 | 49804977 ~ 49805179 (-) |
| G268467 | NA | non-coding | downstream | 146259 | 49791748 ~ 49794617 (-) |
| G268560 | NA | non-coding | upstream | 15150 | 49960915 ~ 49961213 (-) |
| G268673 | NA | non-coding | upstream | 100161 | 50045926 ~ 50046290 (-) |
| G268700 | NA | non-coding | upstream | 132019 | 50077784 ~ 50077987 (-) |
| G268701 | NA | non-coding | upstream | 132354 | 50078119 ~ 50078323 (-) |
| G268702 | NA | non-coding | upstream | 134718 | 50080483 ~ 50080686 (-) |
| LOC110520112 | LOC106586230 | other | downstream | 373402 | 49563841 ~ 49608114 (-) |
| LOC118944672 | NA | other | downstream | 437905 | 49494001 ~ 49503025 (-) |
| G268310 | NA | other | downstream | 445073 | 49495477 ~ 49495803 (-) |
| LOC110520139 | LOC106586251 | other | upstream | 494440 | 50440201 ~ 50442930 (-) |
| LOC110520160 | LOC106586095 | other | upstream | 1182675 | 51126600 ~ 51130404 (-) |
| fgf9 | NA | other | upstream | 1527559 | 51471899 ~ 51478510 (-) |
| il1rl1 | il1rl1 | other | upstream | 1651634 | 51596933 ~ 51619476 (-) |
| LOC110520182 | NA | other | upstream | 2762418 | 52693956 ~ 52708816 (-) |
