Gene
RNA
| Item | Value |
|---|---|
| gene id | G268620 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 50043333 ~ 50043543 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU305204 | True | 211 | lncRNA | 0.36 | 1 | 50043333 | 50043543 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504188 | scrn3 | coding | upstream | 169116 | 49871807 ~ 49874217 (+) |
| LOC110520117 | LOC106586239 | coding | upstream | 177335 | 49862239 ~ 49865998 (+) |
| LOC118959582 | NA | coding | upstream | 275977 | 49757817 ~ 49767356 (+) |
| cdca7a | LOC106586236 | coding | upstream | 307871 | 49731876 ~ 49735462 (+) |
| zak | LOC106586235 | coding | upstream | 311396 | 49676929 ~ 49731937 (+) |
| LOC118944674 | NA | coding | downstream | 1175 | 50044718 ~ 50063834 (+) |
| hoxd13a | hoxd13aa | coding | downstream | 91152 | 50134695 ~ 50136597 (+) |
| hoxd12a | hoxd12 | coding | downstream | 95670 | 50139213 ~ 50141004 (+) |
| hoxd11a | hoxd11aa | coding | downstream | 101112 | 50144655 ~ 50146492 (+) |
| hoxd10a | hoxd10 | coding | downstream | 103268 | 50146811 ~ 50153227 (+) |
| G268618 | NA | non-coding | upstream | 7310 | 50035823 ~ 50036023 (+) |
| G267615 | NA | non-coding | upstream | 57169 | 49985951 ~ 49986164 (+) |
| G267551 | atp5g2 | non-coding | upstream | 61565 | 49979216 ~ 49981768 (+) |
| G267608 | atf2 | non-coding | upstream | 66568 | 49975726 ~ 49976765 (+) |
| G267596 | NA | non-coding | upstream | 85952 | 49957073 ~ 49957381 (+) |
| G268604 | NA | non-coding | downstream | 40567 | 50084110 ~ 50085157 (+) |
| G268714 | NA | non-coding | downstream | 59236 | 50102779 ~ 50103056 (+) |
| G268877 | NA | non-coding | downstream | 188928 | 50232471 ~ 50232690 (+) |
| G268956 | NA | non-coding | downstream | 249142 | 50292685 ~ 50292893 (+) |
| G267529 | NA | other | upstream | 187831 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 487495 | 49554498 ~ 49555838 (+) |
| G267358 | NA | other | upstream | 530858 | 49510803 ~ 49512475 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 3211089 | 46801058 ~ 46832288 (+) |
| G263859 | LOC107588258 | other | upstream | 3858529 | 46184134 ~ 46184804 (+) |
| hoxd3a | hoxd3 | other | downstream | 118758 | 50162278 ~ 50184327 (+) |
| LOC110520146 | ino80d | other | downstream | 558759 | 50601983 ~ 50618761 (+) |
| G269291 | rap2a | other | downstream | 855046 | 50898589 ~ 50900277 (+) |
| LOC110520169 | il1rl1 | other | downstream | 1530437 | 51573980 ~ 51582567 (+) |
| acvr2aa | LOC106586327 | other | downstream | 3123409 | 53124656 ~ 53172428 (+) |
