Gene
RNA
| Item | Value |
|---|---|
| gene id | G268714 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 50102779 ~ 50103056 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU305308 | True | 278 | lncRNA | 0.55 | 1 | 50102779 | 50103056 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944674 | NA | coding | upstream | 38945 | 50044718 ~ 50063834 (+) |
| LOC110504188 | scrn3 | coding | upstream | 228562 | 49871807 ~ 49874217 (+) |
| LOC110520117 | LOC106586239 | coding | upstream | 236781 | 49862239 ~ 49865998 (+) |
| LOC118959582 | NA | coding | upstream | 335423 | 49757817 ~ 49767356 (+) |
| cdca7a | LOC106586236 | coding | upstream | 367317 | 49731876 ~ 49735462 (+) |
| hoxd13a | hoxd13aa | coding | downstream | 31639 | 50134695 ~ 50136597 (+) |
| hoxd12a | hoxd12 | coding | downstream | 36157 | 50139213 ~ 50141004 (+) |
| hoxd11a | hoxd11aa | coding | downstream | 41599 | 50144655 ~ 50146492 (+) |
| hoxd10a | hoxd10 | coding | downstream | 43755 | 50146811 ~ 50153227 (+) |
| hoxd9a | hoxd9aa | coding | downstream | 52779 | 50155835 ~ 50158848 (+) |
| G268604 | NA | non-coding | upstream | 17622 | 50084110 ~ 50085157 (+) |
| G268620 | NA | non-coding | upstream | 59236 | 50043333 ~ 50043543 (+) |
| G268618 | NA | non-coding | upstream | 66756 | 50035823 ~ 50036023 (+) |
| G267615 | NA | non-coding | upstream | 116615 | 49985951 ~ 49986164 (+) |
| G267551 | atp5g2 | non-coding | upstream | 121011 | 49979216 ~ 49981768 (+) |
| G268877 | NA | non-coding | downstream | 129415 | 50232471 ~ 50232690 (+) |
| G268956 | NA | non-coding | downstream | 189629 | 50292685 ~ 50292893 (+) |
| G268970 | NA | non-coding | downstream | 209456 | 50312512 ~ 50312731 (+) |
| G268938 | NA | non-coding | downstream | 218431 | 50321487 ~ 50322542 (+) |
| G267529 | NA | other | upstream | 247277 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 546941 | 49554498 ~ 49555838 (+) |
| G267358 | NA | other | upstream | 590304 | 49510803 ~ 49512475 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 3270535 | 46801058 ~ 46832288 (+) |
| G263859 | LOC107588258 | other | upstream | 3917975 | 46184134 ~ 46184804 (+) |
| hoxd3a | hoxd3 | other | downstream | 59245 | 50162278 ~ 50184327 (+) |
| LOC110520146 | ino80d | other | downstream | 499246 | 50601983 ~ 50618761 (+) |
| G269291 | rap2a | other | downstream | 795533 | 50898589 ~ 50900277 (+) |
| LOC110520169 | il1rl1 | other | downstream | 1470924 | 51573980 ~ 51582567 (+) |
| acvr2aa | LOC106586327 | other | downstream | 3063896 | 53124656 ~ 53172428 (+) |
