G268956



Basic Information


Item Value
gene id G268956
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 50292685 ~ 50292893 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU305583
ggcagagttgcaaagaaaaatacatatctcactggccaatagaaagaaaatattaagatgggcaaaaaaacacagacagtggaaagaggaactctgactagaaggccagcatcctggagtcgcctcttcacagtCATTAACAAGATTAACaatgtccacactgtatttctgataaatgtgATGTTATTTAAAATAATTGACACCTTTTT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU305583 True 209 lncRNA 0.36 1 50292685 50292893

Neighbor


gene id symbol gene type direction distance location
LOC110505268 hoxd1aa coding upstream 103991 50187165 ~ 50188694 (+)
hoxd3a hoxd3 coding upstream 108358 50162278 ~ 50184327 (+)
hoxd4a hxd4a coding upstream 120288 50169601 ~ 50172397 (+)
hoxd9a hoxd9aa coding upstream 133837 50155835 ~ 50158848 (+)
hoxd10a hoxd10 coding upstream 139458 50146811 ~ 50153227 (+)
LOC110520134 ro32 coding downstream 23177 50316070 ~ 50321294 (+)
LOC110520136 NA coding downstream 41407 50334300 ~ 50336340 (+)
agps LOC106586249 coding downstream 45274 50338167 ~ 50377090 (+)
osbpl6 LOC106586252 coding downstream 162146 50455039 ~ 50519865 (+)
gpr1 LOC106586257 coding downstream 296065 50588958 ~ 50592305 (+)
G268877 NA non-coding upstream 59995 50232471 ~ 50232690 (+)
hoxd12a hoxd12 non-coding upstream 151771 50139213 ~ 50141004 (+)
G268714 NA non-coding upstream 189629 50102779 ~ 50103056 (+)
G268604 NA non-coding upstream 207528 50084110 ~ 50085157 (+)
G268620 NA non-coding upstream 249142 50043333 ~ 50043543 (+)
G268970 NA non-coding downstream 19619 50312512 ~ 50312731 (+)
G268938 NA non-coding downstream 28594 50321487 ~ 50322542 (+)
G268939 NA non-coding downstream 29876 50322769 ~ 50323146 (+)
G268936 NA non-coding downstream 30389 50323282 ~ 50324581 (+)
G268941 NA non-coding downstream 31790 50324683 ~ 50324958 (+)
G267529 NA other upstream 437183 49836617 ~ 49855502 (+)
G267381 NA other upstream 736847 49554498 ~ 49555838 (+)
G267358 NA other upstream 780210 49510803 ~ 49512475 (+)
LOC110520046 LOC106586167 other upstream 3460441 46801058 ~ 46832288 (+)
LOC110520146 ino80d other downstream 309409 50601983 ~ 50618761 (+)
G269291 rap2a other downstream 605696 50898589 ~ 50900277 (+)
LOC110520169 il1rl1 other downstream 1281087 51573980 ~ 51582567 (+)
acvr2aa LOC106586327 other downstream 2874059 53124656 ~ 53172428 (+)
LOC110520187 LOC106586325 other downstream 2928534 53174264 ~ 53235027 (+)

Expression



Co-expression Network