Gene
RNA
| Item | Value |
|---|---|
| gene id | G268941 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 50324683 ~ 50324958 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU305568 | True | 276 | lncRNA | 0.29 | 1 | 50324683 | 50324958 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520134 | ro32 | coding | upstream | 3389 | 50316070 ~ 50321294 (+) |
| LOC110505268 | hoxd1aa | coding | upstream | 135989 | 50187165 ~ 50188694 (+) |
| hoxd3a | hoxd3 | coding | upstream | 140356 | 50162278 ~ 50184327 (+) |
| hoxd4a | hxd4a | coding | upstream | 152286 | 50169601 ~ 50172397 (+) |
| hoxd9a | hoxd9aa | coding | upstream | 165835 | 50155835 ~ 50158848 (+) |
| LOC110520136 | NA | coding | downstream | 9342 | 50334300 ~ 50336340 (+) |
| agps | LOC106586249 | coding | downstream | 13209 | 50338167 ~ 50377090 (+) |
| osbpl6 | LOC106586252 | coding | downstream | 130081 | 50455039 ~ 50519865 (+) |
| gpr1 | LOC106586257 | coding | downstream | 264000 | 50588958 ~ 50592305 (+) |
| LOC110520148 | LOC106586260 | coding | downstream | 270658 | 50595616 ~ 50601655 (+) |
| G268936 | NA | non-coding | upstream | 102 | 50323282 ~ 50324581 (+) |
| G268939 | NA | non-coding | upstream | 1537 | 50322769 ~ 50323146 (+) |
| G268938 | NA | non-coding | upstream | 2141 | 50321487 ~ 50322542 (+) |
| G268970 | NA | non-coding | upstream | 11952 | 50312512 ~ 50312731 (+) |
| G268956 | NA | non-coding | upstream | 31790 | 50292685 ~ 50292893 (+) |
| G268987 | NA | non-coding | downstream | 44993 | 50369951 ~ 50370275 (+) |
| G268994 | NA | non-coding | downstream | 62212 | 50387170 ~ 50387393 (+) |
| G268997 | NA | non-coding | downstream | 64988 | 50389946 ~ 50390157 (+) |
| G268998 | NA | non-coding | downstream | 66414 | 50391372 ~ 50391699 (+) |
| G267529 | NA | other | upstream | 469181 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 768845 | 49554498 ~ 49555838 (+) |
| G267358 | NA | other | upstream | 812208 | 49510803 ~ 49512475 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 3492439 | 46801058 ~ 46832288 (+) |
| LOC110520146 | ino80d | other | downstream | 277344 | 50601983 ~ 50618761 (+) |
| G269291 | rap2a | other | downstream | 573631 | 50898589 ~ 50900277 (+) |
| LOC110520169 | il1rl1 | other | downstream | 1249022 | 51573980 ~ 51582567 (+) |
| acvr2aa | LOC106586327 | other | downstream | 2841994 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | other | downstream | 2896469 | 53174264 ~ 53235027 (+) |
