Gene
RNA
| Item | Value |
|---|---|
| gene id | G269003 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 50399264 ~ 50399504 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU305638 | True | 241 | lncRNA | 0.39 | 1 | 50399264 | 50399504 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| agps | LOC106586249 | coding | upstream | 22174 | 50338167 ~ 50377090 (+) |
| LOC110520136 | NA | coding | upstream | 63356 | 50334300 ~ 50336340 (+) |
| LOC110520134 | ro32 | coding | upstream | 77970 | 50316070 ~ 50321294 (+) |
| LOC110505268 | hoxd1aa | coding | upstream | 210570 | 50187165 ~ 50188694 (+) |
| hoxd4a | hxd4a | coding | upstream | 226867 | 50169601 ~ 50172397 (+) |
| osbpl6 | LOC106586252 | coding | downstream | 55535 | 50455039 ~ 50519865 (+) |
| gpr1 | LOC106586257 | coding | downstream | 189454 | 50588958 ~ 50592305 (+) |
| LOC110520148 | LOC106586260 | coding | downstream | 196112 | 50595616 ~ 50601655 (+) |
| LOC110520146 | ino80d | coding | downstream | 202479 | 50601983 ~ 50618761 (+) |
| LOC110520157 | LOC106586094 | coding | downstream | 558510 | 50958014 ~ 50959445 (+) |
| G268998 | NA | non-coding | upstream | 7565 | 50391372 ~ 50391699 (+) |
| G268997 | NA | non-coding | upstream | 9107 | 50389946 ~ 50390157 (+) |
| G268994 | NA | non-coding | upstream | 11871 | 50387170 ~ 50387393 (+) |
| G268987 | NA | non-coding | upstream | 28989 | 50369951 ~ 50370275 (+) |
| G269006 | NA | non-coding | downstream | 4923 | 50404427 ~ 50404724 (+) |
| G269009 | NA | non-coding | downstream | 9352 | 50408856 ~ 50409067 (+) |
| G269019 | NA | non-coding | downstream | 10519 | 50410023 ~ 50410250 (+) |
| G269022 | NA | non-coding | downstream | 15834 | 50415338 ~ 50415543 (+) |
| G268989 | LOC106586251 | non-coding | downstream | 40699 | 50440203 ~ 50443011 (+) |
| hoxd3a | hoxd3 | other | upstream | 216238 | 50162278 ~ 50184327 (+) |
| G267529 | NA | other | upstream | 543762 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 843426 | 49554498 ~ 49555838 (+) |
| G267358 | NA | other | upstream | 886789 | 49510803 ~ 49512475 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 3567020 | 46801058 ~ 46832288 (+) |
| G269291 | rap2a | other | downstream | 499085 | 50898589 ~ 50900277 (+) |
| LOC110520169 | il1rl1 | other | downstream | 1174476 | 51573980 ~ 51582567 (+) |
| acvr2aa | LOC106586327 | other | downstream | 2767448 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | other | downstream | 2821923 | 53174264 ~ 53235027 (+) |
