Gene
RNA
| Item | Value |
|---|---|
| gene id | G269085 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 50527538 ~ 50530940 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU305736 | True | 390 | lncRNA | 0.45 | 3 | 50527538 | 50530940 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| osbpl6 | LOC106586252 | coding | upstream | 7673 | 50455039 ~ 50519865 (+) |
| agps | LOC106586249 | coding | upstream | 150448 | 50338167 ~ 50377090 (+) |
| LOC110520136 | NA | coding | upstream | 191630 | 50334300 ~ 50336340 (+) |
| LOC110520134 | ro32 | coding | upstream | 206244 | 50316070 ~ 50321294 (+) |
| LOC110505268 | hoxd1aa | coding | upstream | 338844 | 50187165 ~ 50188694 (+) |
| gpr1 | LOC106586257 | coding | downstream | 58018 | 50588958 ~ 50592305 (+) |
| LOC110520148 | LOC106586260 | coding | downstream | 64676 | 50595616 ~ 50601655 (+) |
| LOC110520146 | ino80d | coding | downstream | 71043 | 50601983 ~ 50618761 (+) |
| LOC110520157 | LOC106586094 | coding | downstream | 427074 | 50958014 ~ 50959445 (+) |
| uggt2 | LOC106586268 | coding | downstream | 534234 | 51065174 ~ 51110275 (+) |
| G268989 | LOC106586251 | non-coding | upstream | 84527 | 50440203 ~ 50443011 (+) |
| G269022 | NA | non-coding | upstream | 111995 | 50415338 ~ 50415543 (+) |
| G269019 | NA | non-coding | upstream | 117288 | 50410023 ~ 50410250 (+) |
| G269009 | NA | non-coding | upstream | 118471 | 50408856 ~ 50409067 (+) |
| G269006 | NA | non-coding | upstream | 122814 | 50404427 ~ 50404724 (+) |
| G269126 | NA | non-coding | downstream | 114053 | 50644993 ~ 50645192 (+) |
| G269223 | NA | non-coding | downstream | 256631 | 50787571 ~ 50788258 (+) |
| G269224 | NA | non-coding | downstream | 257860 | 50788800 ~ 50790055 (+) |
| G269231 | LOC106586263 | non-coding | downstream | 273650 | 50804590 ~ 50809753 (+) |
| G269279 | NA | non-coding | downstream | 344349 | 50875289 ~ 50875499 (+) |
| hoxd3a | hoxd3 | other | upstream | 344512 | 50162278 ~ 50184327 (+) |
| G267529 | NA | other | upstream | 672036 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 971700 | 49554498 ~ 49555838 (+) |
| G267358 | NA | other | upstream | 1015063 | 49510803 ~ 49512475 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 3695294 | 46801058 ~ 46832288 (+) |
| G269291 | rap2a | other | downstream | 367649 | 50898589 ~ 50900277 (+) |
| LOC110520169 | il1rl1 | other | downstream | 1043040 | 51573980 ~ 51582567 (+) |
| acvr2aa | LOC106586327 | other | downstream | 2636012 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | other | downstream | 2690487 | 53174264 ~ 53235027 (+) |
