Gene
RNA
| Item | Value |
|---|---|
| gene id | G269919 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 50892037 ~ 50892283 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU306651 | True | 247 | lncRNA | 0.43 | 1 | 50892037 | 50892283 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520150 | LOC106586262 | coding | downstream | 103816 | 50665795 ~ 50788221 (-) |
| slc15a1a | LOC106586093 | coding | downstream | 226430 | 50652633 ~ 50665607 (-) |
| LOC110520149 | stk24 | coding | downstream | 255515 | 50619021 ~ 50636522 (-) |
| LOC110520143 | LOC106586256 | coding | downstream | 306142 | 50546066 ~ 50585895 (-) |
| LOC110505276 | NA | coding | downstream | 348605 | 50542986 ~ 50543432 (-) |
| LOC110520154 | rap2a | coding | upstream | 6274 | 50898557 ~ 50911701 (-) |
| LOC110520155 | LOC106586265 | coding | upstream | 20888 | 50912625 ~ 50951028 (-) |
| LOC110504222 | LOC106586266 | coding | upstream | 68576 | 50960859 ~ 51059220 (-) |
| dnajc3a | dnajc3 | coding | upstream | 219562 | 51111845 ~ 51126305 (-) |
| LOC110520160 | LOC106586095 | coding | upstream | 234317 | 51126600 ~ 51130404 (-) |
| G269908 | NA | non-coding | downstream | 18096 | 50873601 ~ 50873941 (-) |
| G269883 | NA | non-coding | downstream | 58932 | 50831640 ~ 50833105 (-) |
| G269866 | NA | non-coding | downstream | 112680 | 50779151 ~ 50779357 (-) |
| G269865 | NA | non-coding | downstream | 113144 | 50778669 ~ 50778893 (-) |
| G269817 | NA | non-coding | downstream | 189041 | 50702246 ~ 50702996 (-) |
| G269920 | NA | non-coding | upstream | 378 | 50892661 ~ 50892890 (-) |
| G269845 | NA | non-coding | upstream | 992 | 50893275 ~ 50894490 (-) |
| G269847 | NA | non-coding | upstream | 2953 | 50895236 ~ 50895829 (-) |
| G269844 | NA | non-coding | upstream | 4328 | 50896611 ~ 50896857 (-) |
| LOC110520139 | LOC106586251 | other | downstream | 449165 | 50440201 ~ 50442930 (-) |
| LOC110520121 | LOC106581751 | other | downstream | 990499 | 49895327 ~ 49901575 (-) |
| LOC110520119 | NA | other | downstream | 1020392 | 49867187 ~ 49871681 (-) |
| LOC110520112 | LOC106586230 | other | downstream | 1324563 | 49563841 ~ 49608114 (-) |
| LOC118944672 | NA | other | downstream | 1389066 | 49494001 ~ 49503025 (-) |
| fgf9 | NA | other | upstream | 581041 | 51471899 ~ 51478510 (-) |
| il1rl1 | il1rl1 | other | upstream | 705116 | 51596933 ~ 51619476 (-) |
| LOC110520182 | NA | other | upstream | 1815900 | 52693956 ~ 52708816 (-) |
| G272713 | LOC106586324 | other | upstream | 2357643 | 53249926 ~ 53251084 (-) |
